RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SEC16AO15027 2179 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 SCAMP2O15127 329 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 PROM1O43490 865 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CPNE3O75131 537 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 STK17BO94768 372 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 NR2F6P10588 404 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 LAMP1P11279 417 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CAPN3P20807 821 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 BUD31P41223 144 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CLDN8P56748 225 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 KCNK10P57789 538 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 HEPACAMQ14CZ8 416 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 MRM1Q6IN84 353 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM71E1Q6IPT2 247 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CEACAM20Q6UY09 585 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 TMPRSS12Q86WS5 348 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 HOMEZQ8IX15 550 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 GBP5Q96PP8 586 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 NPAS2Q99743 824 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ROGDIQ9GZN7 287 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 IL1RL2Q9HB29 575 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 MYNNQ9NPC7 610 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ASIC5Q9NY37 505 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 KCMF1Q9P0J7 381 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ADAM29Q9UKF5 820 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 UTS2RQ9UKP6 389 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 SRPK3Q9UPE1 567 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CROCCQ5TZA2 2017 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 MEN1O00255 615 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ABCB1P08183 1280 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 FURINP09958 794 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CDK4P11802 303 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 HPCAL1P37235 193 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 FEN1P39748 380 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 TSFMP43897 325 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 GCGRP47871 477 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ZFP36L2P47974 494 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 TNFRSF17Q02223 184 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 SMU1Q2TAY7 513 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 FAAH2Q6GMR7 532 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 CPSF7Q8N684 471 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ADAMTS14Q8WXS8 1223 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 MR1Q95460 341 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 PPCDCQ96CD2 204 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 KLHL29Q96CT2 875 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM122AQ96E09 287 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 ZBTB18Q99592 522 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 RTKNQ9BST9 563 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 REEP4Q9H6H4 257 aa14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 SOX17Q9H6I2 414 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 RPF2Q9H7B2 306 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-202ENST00000318007 PTPRBP23467 1997 aa14.52□□□□□ -0.08
PDLIM5-202ENST00000318007 CCDC154A6NI56 674 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 CAPN14A8MX76 684 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 B4E171 279 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 TMX2-CTNND1H3BSU7 103 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SCELO95171 688 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 DDCP20711 480 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 PRPS1L1P21108 318 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 MAOAP21397 527 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 JAK1P23458 1154 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 TSPAN7P41732 249 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 ASMTP46597 345 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 BTG2P78543 158 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC13A2Q13183 592 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SPRED3Q2MJR0 410 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 NKAIN1Q4KMZ8 207 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC2A7Q6PXP3 512 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 LAPTM4BQ86VI4 370 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 RIMKLAQ8IXN7 391 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 STON2Q8WXE9 905 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 METTL2AQ96IZ6 378 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 TAAR9Q96RI9 348 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 CLMPQ9H6B4 373 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC22A11Q9NSA0 550 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 LYARQ9NX58 379 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 SIRT5Q9NXA8 310 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 ZIM2Q9NZV7 527 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 IFT80Q9P2H3 777 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 PCDHB3Q9Y5E6 796 aa14.52□□□□□ -0.09
PDLIM5-202ENST00000318007 CCT8L1PA6NM43 557 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 AIM2O14862 343 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 PGRP06401 933 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 RAB15P59190 212 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 SKP1P63208 163 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 PHC1P78364 1004 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 MMEL1Q495T6 779 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CPTPQ5TA50 214 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CLECL1Q8IZS7 167 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 SPDL1Q96EA4 605 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 OR52E6Q96RD3 313 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 MESP1Q9BRJ9 268 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 FAIM2Q9BWQ8 316 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 TRIM8Q9BZR9 551 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 PHF11Q9UIL8 331 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 SPACA6W5XKT8 324 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 H0YIG0 161 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms