RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 NATD1Q8N6N6 113 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 CLDN22Q8N7P3 220 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GDPD1Q8N9F7 314 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 FAM181AQ8N9Y4 354 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 OR8J1Q8NGP2 316 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GRPEL2Q8TAA5 225 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 C16orf78Q8WTQ4 265 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 ZSCAN5AQ9BUG6 496 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 WRAP53Q9BUR4 548 aaKnown RBP13.22□□□□□ -0.29
MKS1-201ENST00000313863 NLNQ9BYT8 704 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SRRQ9GZT4 340 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 CD84Q9UIB8 345 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 HELZP42694 1942 aaKnown RBP13.22□□□□□ -0.29
MKS1-201ENST00000313863 DENND4CQ5VZ89 1909 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 MEIOCA2RUB1 952 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 KRT87PA6NCN2 255 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GRM6O15303 877 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SH3BGRLO75368 114 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GSTM5P46439 218 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 OCLNQ16625 522 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SLC5A12Q1EHB4 618 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 FAM71E1Q6IPT2 247 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GDPD4Q6W3E5 623 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 VN1R5Q7Z5H4 357 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GATAD2AQ86YP4 633 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 LAS2Q8IYD9 372 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 FBXO15Q8NCQ5 510 aaPredicted RBP13.22□□□□□ -0.29
MKS1-201ENST00000313863 UBE2E3Q969T4 207 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 KIAA1143Q96AT1 154 aaPredicted RBP13.22□□□□□ -0.29
MKS1-201ENST00000313863 ST6GAL2Q96JF0 529 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 PKP4Q99569 1192 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SNTG1Q9NSN8 517 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 IRGMA1A4Y4 181 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 HOXC11O43248 304 aaPredicted RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 SSX4O60224 188 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 CSO75390 466 aaKnown RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 SLC16A8O95907 504 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 YES1P07947 543 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 CRYBB2P43320 205 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 RFX2P48378 723 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 STK19P49842 368 aaPredicted RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 TP53BP2Q13625 1128 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 TBRG1Q3YBR2 411 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 DCST1Q5T197 706 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 C12orf73Q69YU5 71 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 HSDL2Q6YN16 418 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 AP3S1Q92572 193 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 POLR2J2Q9GZM3 115 aaKnown RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 SYNDIG1Q9H7V2 258 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 C11orf16Q9NQ32 467 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
MKS1-201ENST00000313863 CFAP97Q9P2B7 532 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 MAFFQ9ULX9 164 aa13.21□□□□□ -0.29
MKS1-201ENST00000313863 NINQ8N4C6 2090 aa13.21□□□□□ -0.3
MKS1-201ENST00000313863 OR2AG2A6NM03 316 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 MTX2O75431 263 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 SEMA3DO95025 777 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 C1GALT1C1LP0DN25 315 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
MKS1-201ENST00000313863 BDKRB1P46663 353 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 CASP9P55211 416 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 ZNF284Q2VY69 593 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 PDZK1Q5T2W1 519 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 NXNL2Q5VZ03 156 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 FAM131AQ6UXB0 335 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 DPY19L3Q6ZPD9 716 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 CIDECQ96AQ7 238 aaPredicted RBP13.2□□□□□ -0.3
MKS1-201ENST00000313863 PDXPQ96GD0 296 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 IL4I1Q96RQ9 567 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 BARHL1Q9BZE3 327 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 A4GALTQ9NPC4 353 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 ICKQ9UPZ9 632 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 KLHL20Q9Y2M5 609 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 SLC5A10A0PJK1 596 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 TSPAN6O43657 245 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 SOD2P04179 222 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 RB1P06400 928 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 CKMP06732 381 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 SOX3P41225 446 aa13.2□□□□□ -0.3
MKS1-201ENST00000313863 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms