RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 SLC22A4Q9H015 551 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 B4GALT6Q9UBX8 382 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 TLR4O00206 839 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 PLD2O14939 933 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 INPPL1O15357 1258 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 FCER2P06734 321 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 CD22P20273 847 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 RPS3P23396 243 aaKnown RBP eCLIP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 PDHA2P29803 388 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 TUFMP49411 452 aaKnown RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 SPHARQ15513 63 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 PLAG1Q6DJT9 500 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 ZNF614Q8N883 585 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 PCSK9Q8NBP7 692 aaKnown RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 DENND6BQ8NEG7 585 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 CLIP3Q96DZ5 547 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 RIOK2Q9BVS4 552 aaKnown RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
NPAS4-201ENST00000311034 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 HCN4Q9Y3Q4 1203 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 RTTNQ86VV8 2226 aa12.97□□□□□ -0.33
NPAS4-201ENST00000311034 FADS2P1A8MWK0 482 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 CDK6Q00534 326 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 TSEN54Q7Z6J9 526 aaKnown RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 THOC6Q86W42 341 aaKnown RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 POP5Q969H6 163 aaKnown RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 OPALINQ96PE5 141 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 DEFB118Q96PH6 123 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 DKK3Q9UBP4 350 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 GBF1Q92538 1859 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 CENPBD1B2RD01 187 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 LZTS3O60299 673 aaPredicted RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 SCN2BO60939 215 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 IGSF6O95976 241 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 SEMG1P04279 462 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 GALK2Q01415 458 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 VEZF1Q14119 521 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 GPAT3Q53EU6 434 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 Q5BKY6 102 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 TRIQKQ629K1 86 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 MACC1Q6ZN28 852 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 RFPL4BQ6ZWI9 263 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 C19orf18Q8NEA5 215 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 UBTD2Q8WUN7 234 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 FRMD6Q96NE9 622 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 TMEM39AQ9NV64 488 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 COQ3Q9NZJ6 369 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.33
NPAS4-201ENST00000311034 KLK4Q9Y5K2 254 aa12.96□□□□□ -0.33
NPAS4-201ENST00000311034 FAM25AB3EWG3 89 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 FAM25CB3EWG5 89 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 FAM25GB3EWG6 89 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 LRG1P02750 347 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 URODP06132 367 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 C8orf89P0DMQ9 161 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 SRCP12931 536 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 JUPP14923 745 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.34
NPAS4-201ENST00000311034 CRISP1P54107 249 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 GPLD1P80108 840 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.34
NPAS4-201ENST00000311034 E2F2Q14209 437 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 TEAD4Q15561 434 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 C5orf22Q49AR2 442 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 ZNF385BQ569K4 471 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 ARSIQ5FYB1 569 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 CEP78Q5JTW2 689 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 DDI2Q5TDH0 399 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 TMEM220Q6QAJ8 160 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 WDR53Q7Z5U6 358 aaPredicted RBP12.96□□□□□ -0.34
NPAS4-201ENST00000311034 TRIM69Q86WT6 500 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 SYT14Q8NB59 555 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 SNAPC3Q92966 411 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.34
NPAS4-201ENST00000311034 HHATLQ9HCP6 504 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 PLCXD1Q9NUJ7 323 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 ZDHHC3Q9NYG2 299 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 PCM1Q15154 2024 aa12.96□□□□□ -0.34
NPAS4-201ENST00000311034 C12orf71A8MTZ7 269 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 AKR7A2O43488 359 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 TLX2O43763 284 aaPredicted RBP12.95□□□□□ -0.34
NPAS4-201ENST00000311034 GCM2O75603 506 aaPredicted RBP12.95□□□□□ -0.34
NPAS4-201ENST00000311034 VNN2O95498 520 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 HOXC8P31273 242 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 EPHB3P54753 998 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 ZNF79Q15937 498 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 BTBD16Q32M84 506 aa12.95□□□□□ -0.34
NPAS4-201ENST00000311034 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms