RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LRTOMTQ8WZ04 291 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PAIP1Q9H074 479 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 C8orf4Q9NR00 106 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 ING3Q9NXR8 418 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 ENTPD2Q9Y5L3 495 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PSAT1Q9Y617 370 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 LRIT3Q3SXY7 679 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 HSF5Q4G112 596 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 C10orf62Q5T681 223 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 LPCAT4Q643R3 524 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 OR52E8Q6IFG1 317 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 KIAA1211LQ6NV74 962 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 OR10G2Q8NGC3 310 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 SGCDQ92629 289 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RPH3AQ9Y2J0 694 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RTCAO00442 366 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RGS10O43665 173 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 SSNA1O43805 119 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RPS6KA3P51812 740 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 MAZP56270 477 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 DOC2AQ14183 400 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 OR5P2Q8WZ92 322 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 FOXQ1Q9C009 403 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 TPK1Q9H3S4 243 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PNPLA3Q9NST1 481 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 IFT52Q9Y366 437 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 FADS3Q9Y5Q0 445 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 XIRP1Q702N8 1843 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 UBE2QL1A1L167 161 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TAF4O00268 1085 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC30A4O14863 429 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 RAP2AP10114 183 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 IRF2P14316 349 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CREB1P16220 341 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CTHP32929 405 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 UBE2NP61088 152 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 EMX2Q04743 252 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF33BQ06732 778 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF846Q147U1 533 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SPANXN4Q5MJ08 99 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LHX8Q68G74 356 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 HMGN2P46Q86SG4 172 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PDZD3Q86UT5 571 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LIX1LQ8IVB5 337 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PLD6Q8N2A8 252 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF676Q8N7Q3 588 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 RBP7Q96R05 134 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SERINC2Q96SA4 455 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TRIM8Q9BZR9 551 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 MEAF6Q9HAF1 191 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TPT1P8Q9HAU6 139 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ANKMY1Q9P2S6 941 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PRSS51A0A1B0GVH4 220 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 C2CD4DB7Z1M9 353 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 F11P03951 625 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TIA1P31483 386 aaKnown RBP eCLIP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ARSDP51689 593 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 AGBL5Q8NDL9 886 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TOR1AIP2Q8NFQ8 470 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 OR4C15Q8NGM1 316 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SIGLEC10Q96LC7 697 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ASB16Q96NS5 453 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 NSUN5Q96P11 429 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 B3GNT4Q9C0J1 378 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CLEC4MQ9H2X3 399 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 S100A14Q9HCY8 104 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZDHHC18Q9NUE0 388 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LAMB2P55268 1798 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 C2orf92A0A1B0GVN3 265 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SHISA7A6NL88 538 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SRFP11831 508 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ENDOUP21128 410 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SIM1P81133 766 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 DLX2Q07687 328 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 MERTKQ12866 999 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TREML1Q86YW5 311 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LRCH3Q96II8 777 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 MYADMQ96S97 322 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 BHLHE41Q9C0J9 482 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM168Q9H0V1 697 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 IL26Q9NPH9 171 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 GPRC5BQ9NZH0 403 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 RPS9P46781 194 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 NR0B1P51843 470 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CTBSQ01459 385 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 KLHL22Q53GT1 634 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 USP30Q70CQ3 517 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF382Q96SR6 550 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ARRDC1-AS1Q9H2J1 176 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CLK4Q9HAZ1 481 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CSNK1G1Q9HCP0 422 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SPO11Q9Y5K1 396 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 NSG1A0A0A6YYJ2 146 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 GFRA2O00451 464 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 EDNRAP25101 427 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms