RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
PRKCB-201ENST00000303531 ORAI3Q9BRQ5 295 aa13.4□□□□□ -0.26
PRKCB-201ENST00000303531 PAK1IP1Q9NWT1 392 aaPredicted RBP13.4□□□□□ -0.26
PRKCB-201ENST00000303531 JUPP14923 745 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SHMT2P34897 504 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SLC36A3Q495N2 470 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SPAG16Q8N0X2 631 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SGCDQ92629 289 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 STOX2Q9P2F5 926 aaPredicted RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ASGR2P07307 311 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 IVDP26440 423 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 NAXEQ8NCW5 288 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 PSD4Q8NDX1 1056 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 OR52B6Q8NGF0 335 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 OR8D2Q9GZM6 311 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 METTL7AQ9H8H3 244 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 I3L521 148 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 CASRP41180 1078 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 TBPL1P62380 186 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 TMPRSS9Q7Z410 1059 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 HMGN2P46Q86SG4 172 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ARPC4P59998 168 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 GTF2IRD2BQ6EKJ0 949 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 GTF2IRD2Q86UP8 949 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 OR8K3Q8NH51 312 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 NSMAFQ92636 917 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SPHK2Q9NRA0 654 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 EXTL2Q9UBQ6 330 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 RNF13O43567 381 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 GSRP00390 522 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 KANK2Q63ZY3 851 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 HACD2Q6Y1H2 254 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 GKN2Q86XP6 184 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ZBTB8BQ8NAP8 495 aaPredicted RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■□□□ 13.5
PRKCB-201ENST00000303531 POLDIP3Q9BY77 421 aaKnown RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 LRRN3Q9H3W5 708 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 DNAJC15Q9Y5T4 150 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ARFGEF2Q9Y6D5 1785 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SLC19A2O60779 497 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 RFC2P35250 354 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 MAGEA12P43365 314 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
PRKCB-201ENST00000303531 RAB12Q6IQ22 244 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 PYHIN1Q6K0P9 492 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 TMEM156Q8N614 296 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 SARDHQ9UL12 918 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 ANKRD12Q6UB98 2062 aa13.39□□□□□ -0.27
PRKCB-201ENST00000303531 MT-ND2P03891 347 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SLC9A3P48764 834 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 FAM189A2Q15884 450 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF423Q2M1K9 1284 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 AIFM2Q9BRQ8 373 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 TPD52L2O43399 206 aaKnown RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 NR2C1P13056 603 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 HSD3B1P14060 373 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 HSD3B2P26439 372 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SPIN3Q5JUX0 258 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OR6N2Q8NGY6 317 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 GMLQ99445 158 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 ABCG2Q9UNQ0 655 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 PAK4O96013 591 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 TBC1D25Q3MII6 688 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 GXYLT1Q4G148 440 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 ENPP6Q6UWR7 440 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 Q8N9G6 341 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 NUP43Q8NFH3 380 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OR2T33Q8NG76 320 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 HERPUD2Q9BSE4 406 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 RETREG1Q9H6L5 497 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 FAM118AQ9NWS6 357 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 GSTT2P0CG29 244 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 TREM1Q9NP99 234 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 PCDHGA2Q9Y5H1 932 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 A0A1B0GVI7 797 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SH3BP2P78314 561 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 DOC2AQ14183 400 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OGFRL1Q5TC84 451 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OR8S1Q8NH09 359 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 C14orf119Q9NWQ9 140 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms