RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 NR4A3Q92570 626 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 PHRF1Q9P1Y6 1649 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CDH15P55291 814 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 RPS15P62841 145 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 DNASE1L3Q13609 305 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 GBX1Q14549 363 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CATSPEREQ5SY80 951 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 RETREG1Q9H6L5 497 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 THEGLP0DJG4 465 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 SLC9A3P48764 834 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 TSPAN33Q86UF1 283 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 CCDC120Q96HB5 630 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 SLC17A9Q9BYT1 436 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 WDR6Q9NNW5 1121 aaKnown RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 B4GALT7Q9UBV7 327 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 CDRT1O95170 752 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 LRRC25Q8N386 305 aaPredicted RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 PEX11GQ96HA9 241 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NPPAP01160 153 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 ADRB3P13945 408 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 TIA1P31483 386 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF84P51523 738 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 DIO3P55073 304 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 EIF4HQ15056 248 aaKnown RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 TOMM5Q8N4H5 51 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 CIB4A0PJX0 185 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 PGGT1BP53609 377 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NFE2L1Q14494 772 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 PYHIN1Q6K0P9 492 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 PLCZ1Q86YW0 608 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NSMAFQ92636 917 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 AASSQ9UDR5 926 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NUP188Q5SRE5 1749 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF217O75362 1048 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 S100A6P06703 90 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 AOC1P19801 751 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 RAB33AQ14088 237 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 AURKBQ96GD4 344 aaPredicted RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 MARCH4Q9P2E8 410 aaPredicted RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 ZSCAN5BA6NJL1 495 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 SLC22A1O15245 554 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 EMC8O43402 210 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 LATS1O95835 1130 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 RNH1P13489 461 aaKnown RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 MAZP56270 477 aaKnown RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 MRPL49Q13405 166 aaKnown RBP16.6■□□□□ 0.25
SHANK1-201ENST00000293441 TECRLQ5HYJ1 363 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NXPE4Q6UWF7 544 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 GALNT15Q8N3T1 639 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 SHKBP1Q8TBC3 707 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 ACOT12Q8WYK0 555 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 BORCS6Q96GS4 357 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 RARRES3Q9UL19 164 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 MGAT4BQ9UQ53 548 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 HCN4Q9Y3Q4 1203 aa16.6■□□□□ 0.25
SHANK1-201ENST00000293441 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 OR2AT4A6NND4 320 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 KLF11O14901 512 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 KDM4BO94953 1096 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 RABIFP47224 123 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 MEP1AQ16819 746 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 C6orf136Q5SQH8 315 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 MORN1Q5T089 497 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 OR4C11Q6IEV9 310 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 PAQR7Q86WK9 346 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 PLXDC1Q8IUK5 500 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 GALNT12Q8IXK2 581 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM41AQ96HV5 264 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 PTGDR2Q9Y5Y4 395 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 LRP6O75581 1613 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 PROM1O43490 865 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 ARL6IP5O75915 188 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 S1PR4O95977 384 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 IFNA21P01568 189 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF806P0C7X5 589 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 LDLRAD1Q5T700 205 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 OR4N5Q8IXE1 308 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 RPLP0P6Q8NHW5 317 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 LMO3Q8TAP4 145 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 SCGB3A2Q96PL1 93 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 RPF2Q9H7B2 306 aaKnown RBP16.59■□□□□ 0.25
SHANK1-201ENST00000293441 TIGARQ9NQ88 270 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 C12orf4Q9NQ89 552 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 C14orf166Q9Y224 244 aaKnown RBP16.59■□□□□ 0.25
SHANK1-201ENST00000293441 MYH1P12882 1939 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 SLC18A1P54219 525 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 PTGR1Q14914 329 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 FOXJ1Q92949 421 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 ERMAPQ96PL5 475 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-201ENST00000293441 TRIB3Q96RU7 358 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 H3BQ06 376 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms