RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TUBB6Q9BUF5 446 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 GATA5Q9BWX5 397 aaPredicted RBP6.14□□□□□ -1.43
CD44-204ENST00000279452 EBPLQ9BY08 206 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 MFRPQ9BY79 579 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 SEMA4CQ9C0C4 833 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 LHPPQ9H008 270 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 EPS8L2Q9H6S3 715 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 RPF2Q9H7B2 306 aaKnown RBP6.14□□□□□ -1.43
CD44-204ENST00000279452 BRF2Q9HAW0 419 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 KCNK13Q9HB14 408 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 LYRM4Q9HD34 91 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 PFDN4Q9NQP4 134 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 NECTIN3Q9NQS3 549 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 MS4A12Q9NXJ0 267 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 NKIRAS1Q9NYS0 192 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 LUZP4Q9P127 313 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 VPS29Q9UBQ0 182 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 TUBD1Q9UJT1 453 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 ZNF225Q9UK10 706 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 TSC22D4Q9Y3Q8 395 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 ZNF451Q9Y4E5 1061 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 MMACHCQ9Y4U1 282 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 APC2O95996 2303 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 ACACBO00763 2458 aa6.14□□□□□ -1.43
CD44-204ENST00000279452 MAP1BP46821 2468 aaKnown RBP6.14□□□□□ -1.43
CD44-204ENST00000279452 CHD8Q9HCK8 2581 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 SNRNP200O75643 2136 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 A0A0A6YYD5 115 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TMEM120BA0PK00 339 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TMEM233B4DJY2 109 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 H3BQF6 201 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 K7EM74 188 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 AZIN1O14977 448 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 DYRK3O43781 588 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TMPRSS11DO60235 418 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 PCDH7O60245 1069 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 NPHS1O60500 1241 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 DPM1O60762 260 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 GUCY1B2O75343 617 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 SKAP2O75563 359 aaPredicted RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 SCELO95171 688 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 AIFM1O95831 613 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 F10P00742 488 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 PDGFAP04085 211 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 SERPINA7P05543 415 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 BPGMP07738 259 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 PRR35P0CG20 571 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 UROSP10746 265 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ITGAMP11215 1152 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ICAM2P13598 275 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 HSD3B1P14060 373 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 COX7A2P14406 83 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 CHN1P15882 459 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 BGNP21810 368 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 HSD3B2P26439 372 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 PPP2R1BP30154 601 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 BSGP35613 385 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 HSD17B7P56937 341 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TAS2R50P59544 299 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 AP2B1P63010 937 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 FOLH1Q04609 750 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ZNF33BQ06732 778 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 Q0VFX4 171 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 MYBPC3Q14896 1274 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 NR6A1Q15406 480 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 EXT1Q16394 746 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 SPIN4Q56A73 249 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ARL13AQ5H913 290 aaPredicted RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 C6orf163Q5TEZ5 329 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 VWA5B1Q5TIE3 1220 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ABHD17BQ5VST6 288 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 AGAP7PQ5VUJ5 663 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 C18orf63Q68DL7 685 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TMEM205Q6UW68 189 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 COMMD6Q7Z4G1 85 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 METTL4Q8N3J2 472 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ZCCHC7Q8N3Z6 543 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 GBP7Q8N8V2 638 aaPredicted RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 LSM14AQ8ND56 463 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 PLPP5Q8NEB5 264 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 AGAP4Q96P64 663 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 DGAT2Q96PD7 388 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TRMOQ9BU70 441 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 FAIM2Q9BWQ8 316 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ALOXE3Q9BYJ1 711 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ACPTQ9BZG2 426 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ILKAPQ9H0C8 392 aaPredicted RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 ACBD3Q9H3P7 528 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TMBIM4Q9HC24 238 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 SSU72Q9NP77 194 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 TEX10Q9NXF1 929 aaPredicted RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 ABI3Q9P2A4 366 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 TEKT2Q9UIF3 430 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ATG4BQ9Y4P1 393 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 PCDHGA9Q9Y5G4 932 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 PTGDR2Q9Y5Y4 395 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 ACTL7BQ9Y614 415 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms