RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 GABARAPL1Q9H0R8 117 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 OSER1Q9NX31 292 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 HCSTQ9UBK5 93 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 CBX4O00257 560 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SLC28A1O00337 649 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SEPT4O43236 478 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 FGF1P05230 155 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 CHMP24386 653 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 VIPR1P32241 457 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 GATMP50440 423 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SUOXP51687 545 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 ERVFC1P60507 584 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TEKQ02763 1124 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 HKDC1Q2TB90 917 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 AFTPHQ6ULP2 937 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 PRSS42Q7Z5A4 293 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 GDPD1Q8N9F7 314 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 PLEKHB1Q9UF11 243 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 STUB1Q9UNE7 303 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 CCL27Q9Y4X3 112 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TRBV5-3A0A0A0MS03 114 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 TCRBV16S1A1N1A0A5B0 115 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 KDM4BO94953 1096 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 ALPIP09923 528 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 TRAPPC2P0DI81 140 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 TRAPPC2BP0DI82 140 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 KCNE1P15382 129 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 DRD5P21918 477 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 MAD2L1Q13257 205 aaPredicted RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 COL9A2Q14055 689 aaPredicted RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 COX20Q5RI15 118 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 SBSNQ6UWP8 590 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 CBLL1Q75N03 491 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 LUZP2Q86TE4 346 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 LHFPL3Q86UP9 236 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 COQ8AQ8NI60 647 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 CD99L2Q8TCZ2 262 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 C7orf34Q96L11 122 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 ZYG11BQ9C0D3 744 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 DIABLOQ9NR28 239 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 RNF186Q9NXI6 227 aa12.27□□□□□ -0.44
HERC6-202ENST00000273960 MRPL15Q9P015 296 aaKnown RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 EXO1Q9UQ84 846 aaKnown RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 TP53BP1Q12888 1972 aaPredicted RBP12.27□□□□□ -0.44
HERC6-202ENST00000273960 ZNF670-ZNF695F2Z2N8 137 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 SLC9A3R1O14745 358 aaPredicted RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 SSNA1O43805 119 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 LANCL1O43813 399 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 PRAMEF12O95522 483 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 OGNP20774 298 aaKnown RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 SOAT1P35610 550 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 C1DQ13901 141 aaKnown RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 RNF180Q86T96 592 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 NFKBIDQ8NI38 313 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 TTC9Q92623 222 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 GTPBP2Q9BX10 602 aaKnown RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 TSSK6Q9BXA6 273 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 ATP13A1Q9HD20 1204 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 SCN4AP35499 1836 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 CD8B2A6NJW9 211 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 TOR1AO14656 332 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 OR10H3O60404 316 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 PQBP1O60828 265 aaKnown RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 CD8BP10966 210 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 LHCGRP22888 699 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 TBX4P57082 545 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 RBBP4Q09028 425 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 KLHL22Q53GT1 634 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 IGSF11Q5DX21 431 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 ADNP2Q6IQ32 1131 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 KIAA1841Q6NSI8 718 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 FAM126AQ9BYI3 521 aaPredicted RBP12.27□□□□□ -0.45
HERC6-202ENST00000273960 GPR63Q9BZJ6 419 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 SPNS1Q9H2V7 528 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.45
HERC6-202ENST00000273960 HTTP42858 3142 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 LOC285095A0A1B0GVY8 99 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 TLR4O00206 839 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 DVL2O14641 736 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 HRO43593 1189 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 GADD45GO95257 159 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CRYBA2P53672 197 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 TRIM69Q86WT6 500 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CCDC117Q8IWD4 279 aaPredicted RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 SLC30A8Q8IWU4 369 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms