RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ETFAP13804 333 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 IDSP22304 550 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 RPL3P39023 403 aaKnown RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 MAN2A2P49641 1150 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ARF5P84085 180 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF91Q05481 1191 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 HEPACAMQ14CZ8 416 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 SPIN4Q56A73 249 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZBTB37Q5TC79 503 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 C12orf73Q69YU5 71 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 C22orf42Q6IC83 251 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 MZT2AQ6P582 158 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 OR8H1Q8NGG4 311 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 TEFMQ96QE5 360 aaKnown RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 DCLRE1CQ96SD1 692 aaKnown RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 NT5DC2Q9H857 520 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 C11orf16Q9NQ32 467 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PTTG3PQ9NZH4 202 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 DNAJC27Q9NZQ0 273 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 EIF3KQ9UBQ5 218 aaKnown RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 WASHC1A8K0Z3 465 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 J3KTA2 159 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 INPPL1O15357 1258 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PDGFAP04085 211 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC10A3P09131 477 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF865P0CJ78 1059 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 BPIP17213 487 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 STK19P49842 368 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 WDR5P61964 334 aaKnown RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 BTG1P62324 171 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZXDBP98169 803 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 IKZF1Q13422 519 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 KLHL22Q53GT1 634 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 GRAMD2AQ8IUY3 354 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 UBE2J2Q8N2K1 259 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF557Q8N988 423 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 TP53I13Q8NBR0 393 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PLD4Q96BZ4 506 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 SOSTQ9BQB4 213 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 SYT17Q9BSW7 474 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 CWH43Q9H720 699 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PPP1R3EQ9H7J1 279 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 KCND3Q9UK17 655 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 TRBC2A0A5B9 178 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 F8W810 466 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SGK494L7N484 410 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 WWP2O00308 870 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 NR2F6P10588 404 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ARSBP15848 533 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 CD52P31358 61 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 GJA5P36382 358 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 MAPK8P45983 427 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 TGM4P49221 684 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SMIM11AP58511 58 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SNRPD2P62316 118 aaKnown RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 RIN1Q13671 783 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 XKR6Q5GH73 641 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 DENND1CQ8IV53 801 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 FAM217AQ8IXS0 508 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 GHDCQ8N2G8 530 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC37A3Q8NCC5 494 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 C11orf24Q96F05 449 aaPredicted RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ADAM2Q99965 735 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC35A5Q9BS91 424 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 PRM3Q9NNZ6 103 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 MCUBQ9NWR8 336 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 NLKQ9UBE8 527 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 GULP1Q9UBP9 304 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 INMT-MINDY4F8WBC2 141 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 H0YIV9 168 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 KPNA5O15131 536 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC22A5O76082 557 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SRCP12931 536 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 CFL1P23528 166 aaKnown RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ITPKAP23677 461 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 CCR7P32248 378 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 IRS1P35568 1242 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 XKP51811 444 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 MVDP53602 400 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 BCL2L1Q07817 233 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 MGAT3Q09327 533 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 DOC2BQ14184 412 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 GANABQ14697 944 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms