RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 C2orf92A0A1B0GVN3 265 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SAGE2PA6NJ88 616 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 M0R3H8 397 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 FZD6O60353 706 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SLITRK5O94991 958 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PRPS2P11908 318 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 MRPL19P49406 292 aaKnown RBP12.41□□□□□ -0.42
SNX1-201ENST00000261889 CXCR4P61073 352 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SELENOWP63302 87 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 C2orf80Q0P641 193 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 GPR17Q13304 367 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 MPEG1Q2M385 716 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 FAM26DQ5JW98 314 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PRR23CQ6ZRP0 262 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ASB18Q6ZVZ8 466 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 CCDC190Q86UF4 302 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 LHFPL3Q86UP9 236 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
SNX1-201ENST00000261889 SMAP2Q8WU79 429 aaPredicted RBP12.41□□□□□ -0.42
SNX1-201ENST00000261889 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 MAT2BQ9NZL9 334 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 V9GYH0 126 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ATG2BQ96BY7 2078 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 FFAR1O14842 300 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PPM1DO15297 605 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ZNF45Q02386 682 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ZNF544Q6NX49 715 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 DPY19L3Q6ZPD9 716 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 OR5D16Q8NGK9 328 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 KLK6Q92876 244 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
SNX1-201ENST00000261889 HDHD5Q9BXW7 423 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 TBC1D17Q9HA65 648 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ACER3Q9NUN7 267 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 TRPM5Q9NZQ8 1165 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ARID1AO14497 2285 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 FABP12A6NFH5 140 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 PRRG1O14668 218 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 SCAMP2O15127 329 aaKnown RBP12.4□□□□□ -0.42
SNX1-201ENST00000261889 GPC1P35052 558 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TUBA1BP68363 451 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 LMAN2Q12907 356 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 GPR50Q13585 617 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 MICAQ29983 383 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 IFI44LQ53G44 452 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 USP30Q70CQ3 517 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TUBA1AQ71U36 451 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 SLC38A6Q8IZM9 456 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 PITX2Q99697 317 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 MVB12BQ9H7P6 319 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 KCTD5Q9NXV2 234 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TEKT2Q9UIF3 430 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 ANTXRLA6NF34 631 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 C12orf71A8MTZ7 269 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TEX46H3BTG2 121 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 SEMG1P04279 462 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 IDSP22304 550 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 METAP1P53582 386 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 CDK6Q00534 326 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 RING1Q06587 406 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 TARDBPQ13148 414 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNX1-201ENST00000261889 PDZK1Q5T2W1 519 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 CERS6Q6ZMG9 384 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 OR7G3Q8NG95 312 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 CYB5D2Q8WUJ1 264 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 ZFPM2Q8WW38 1151 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
SNX1-201ENST00000261889 TBX5Q99593 518 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 WRAP53Q9BUR4 548 aaKnown RBP12.4□□□□□ -0.42
SNX1-201ENST00000261889 GABARAPL1Q9H0R8 117 aa12.4□□□□□ -0.42
SNX1-201ENST00000261889 A0A1W2PQ45 241 aaPredicted RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 A0A1W2PQY0 241 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 ISPDA4D126 451 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 C1SP09871 688 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 CDC42P60953 191 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 RPS25P62851 125 aaKnown RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SLC30A8Q8IWU4 369 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 ASB11Q8WXH4 323 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 TESCQ96BS2 214 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 WACQ9BTA9 647 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 GALNT9Q9HCQ5 603 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 NDRG2Q9UN36 371 aaKnown RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 HSPB11Q9Y547 144 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 MAU2Q9Y6X3 613 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PLXND1Q9Y4D7 1925 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 CCDC182A6NF36 153 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PLOD3O60568 738 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 GSTM1P09488 218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms