RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZNF45Q02386 682 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF284Q2VY69 593 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 GDPD4Q6W3E5 623 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 LINC00299Q6ZSB3 139 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 RNF165Q6ZSG1 346 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ARMCX6Q7L4S7 300 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 GABARAPL3Q9BY60 117 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 PADI2Q9Y2J8 665 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 MRPS23Q9Y3D9 190 aaKnown RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 CFAP20Q9Y6A4 193 aaKnown RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 HAT1O14929 419 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 LEFTY1O75610 366 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 CASP3P42574 277 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 TRIM40Q6P9F5 258 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 LILRA6Q6PI73 481 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 NRARPQ7Z6K4 114 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 MEX3DQ86XN8 651 aaKnown RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 FIBINQ8TAL6 211 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 NRTNQ99748 197 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ASPNQ9BXN1 380 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 BEX2Q9BXY8 128 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 NDEL1Q9GZM8 345 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 REEP4Q9H6H4 257 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 PRKAB1Q9Y478 270 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 WDFY4Q6ZS81 3184 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 VPS13AQ96RL7 3174 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 A0A1W2PRB8 838 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 FADS2P1A8MWK0 482 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 SGTAO43765 313 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 ENTPD6O75354 484 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 PRPH2P23942 346 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 CHMP24386 653 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 TNFSF8P32971 234 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 PTGER1P34995 402 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 POLR2LP62875 67 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 CDKL4Q5MAI5 379 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 OLIG3Q7RTU3 272 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 C11orf96Q7Z7L8 435 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 RASGEF1AQ8N9B8 481 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 IL17FQ96PD4 163 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 TRNT1Q96Q11 434 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 SIGLEC11Q96RL6 698 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 NMNAT1Q9HAN9 279 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 ACER3Q9NUN7 267 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 CORO2BQ9UQ03 480 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 EXO1Q9UQ84 846 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 A0A0G2JN53 185 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 DYRK3O43781 588 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 KRT75O95678 551 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF763Q0D2J5 394 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 Q6ZNB5 142 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 CACUL1Q86Y37 369 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 VN1R2Q8NFZ6 395 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 SLC30A2Q9BRI3 323 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 TMCC3Q9ULS5 477 aa13.82□□□□□ -0.2
SFSWAP-201ENST00000261674 CCRL2O00421 344 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 IDH3BO43837 385 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 GPX5O75715 221 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 IFNW1P05000 195 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 SERPIND1P05546 499 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 BCHEP06276 602 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 FHP07954 510 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 ITGA2P17301 1181 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CEBPBP17676 345 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 UGT2B10P36537 528 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 TBPL1P62380 186 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 OLR1P78380 273 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 NXNL2Q5VZ03 156 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 FRMPD2BQ6IN97 320 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 GRHL2Q6ISB3 625 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PAQR6Q6TCH4 344 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 DENND6BQ8NEG7 585 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PHOSPHO2Q8TCD6 241 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 AP2M1Q96CW1 435 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 WBP11Q9Y2W2 641 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 DYRK1BQ9Y463 629 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PTPRSQ13332 1948 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 LEFTY2O00292 366 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 DOC2BQ14184 412 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 SPDYE7PQ495Y7 208 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 LIPKQ5VXJ0 399 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CEACAM20Q6UY09 585 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 NEK10Q6ZWH5 1172 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 RBM45Q8IUH3 476 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 LACC1Q8IV20 430 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PGBD3Q8N328 593 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 IQCF1Q8N6M8 205 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms