RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TP53BP2Q13625 1128 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 EIF4HQ15056 248 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CHRNA6Q15825 494 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 UGT3A2Q3SY77 523 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SPANXN3Q5MJ09 141 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 HSDL2Q6YN16 418 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ZNF367Q7RTV3 350 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CENPLQ8N0S6 344 aaPredicted RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 PGBD3Q8N328 593 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 C19orf18Q8NEA5 215 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SUSD6Q92537 303 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SEMA4DQ92854 862 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 PYCR2Q96C36 320 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 NECTIN4Q96NY8 510 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ACBD6Q9BR61 282 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MRPL45Q9BRJ2 306 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MS4A7Q9GZW8 240 aaPredicted RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SMPD4Q9NXE4 827 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CYTH4Q9UIA0 394 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SSR3Q9UNL2 185 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 FAM50BQ9Y247 325 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 DOCK8Q8NF50 2099 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MYO10Q9HD67 2058 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 A0A096LPK6 155 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 FAM240BA0A1B0GVZ2 78 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 FAM221BA6H8Z2 402 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 INMT-MINDY4F8WBC2 141 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 WWP2O00308 870 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 UBE2CO00762 179 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 HCRTO43612 131 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 VEGFDO43915 354 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 PCDHGA12O60330 932 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 PAPLNO95428 1278 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 VNN2O95498 520 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 IFNA10P01566 189 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CYBBP04839 570 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 TSPAN8P19075 237 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ATP5A1P25705 553 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 LMO2P25791 158 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 LAP3P28838 519 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 LIPEQ05469 1076 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SNTB1Q13884 538 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SLC39A12Q504Y0 691 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 AFTPHQ6ULP2 937 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 LAYNQ6UX15 382 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 GPR149Q86SP6 731 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 NAGSQ8N159 534 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CNIH3Q8TBE1 160 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 UCN3Q969E3 161 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 EXOSC8Q96B26 276 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MYO19Q96H55 970 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 COQ10AQ96MF6 247 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 CMTM3Q96MX0 182 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 COL21A1Q96P44 957 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MAGIXQ9H6Y5 334 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 GLOD4Q9HC38 313 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 MRPS30Q9NP92 439 aaKnown RBP11.34□□□□□ -0.59
CCNA1-201ENST00000255465 C11orf16Q9NQ32 467 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 NSMCE4AQ9NXX6 385 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
CCNA1-201ENST00000255465 ANKDD1BA6NHY2 528 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PRRG1O14668 218 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 KIAA0513O60268 411 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PAK4O96013 591 aaPredicted RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 HNRNPA1P09651 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 FOLR2P14207 255 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 HNRNPLP14866 589 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 RAB3BP20337 219 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PAICSP22234 425 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PCSK1P29120 753 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 HOXA9P31269 272 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 SDC4P31431 198 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 CSRP3P50461 194 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF81P51508 661 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 TBX4P57082 545 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 ACTR1AP61163 376 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 ABATP80404 500 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 DHODHQ02127 395 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 ILKQ13418 452 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 RAPSNQ13702 412 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 MAD2L1BPQ15013 274 aaPredicted RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 UAP1L1Q3KQV9 507 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 LGALSLQ3ZCW2 172 aaPredicted RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 ATAT1Q5SQI0 421 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 DNAJC24Q6P3W2 148 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 FAM111BQ6SJ93 734 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 RFX6Q8HWS3 928 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 NAXDQ8IW45 347 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms