RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NPRL3Q12980 569 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 KHDRBS2Q5VWX1 349 aaKnown RBP15.02■□□□□ -0
LRFN1-201ENST00000248668 AHSA2Q719I0 299 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 SLC5A8Q8N695 610 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 AIF1LQ9BQI0 150 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 TRIT1Q9H3H1 467 aaKnown RBP15.02■□□□□ -0
LRFN1-201ENST00000248668 C1GALT1Q9NS00 363 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 GPSM3Q9Y4H4 160 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 ALPK3Q96L96 1907 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 ITGAMP11215 1152 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 PSMB9P28065 219 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 PIK3CBP42338 1070 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 GP2P55259 537 aaKnown RBP15.02■□□□□ -0
LRFN1-201ENST00000248668 PDE7AQ13946 482 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 CEACAM20Q6UY09 585 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 NLGN4XQ8N0W4 816 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 PGBD3Q8N328 593 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 ZNF420Q8TAQ5 688 aaPredicted RBP15.02■□□□□ -0
LRFN1-201ENST00000248668 UBE2E3Q969T4 207 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 C17orf62Q9BQA9 187 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 MYO15AQ9UKN7 3530 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 NUDT6P53370 316 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 OCA2Q04671 838 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 TEAD4Q15561 434 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 MLF2Q15773 248 aaPredicted RBP15.02□□□□□ -0.01
LRFN1-201ENST00000248668 EXOC3L2Q2M3D2 409 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 SPDYE7PQ495Y7 208 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 DEPDC1Q5TB30 811 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 KIAA1614Q5VZ46 1190 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 GTF2IRD2BQ6EKJ0 949 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 TRIM40Q6P9F5 258 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 GTF2IRD2Q86UP8 949 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 UTP15Q8TED0 518 aaKnown RBP15.02□□□□□ -0.01
LRFN1-201ENST00000248668 SETD7Q8WTS6 366 aaKnown RBP15.02□□□□□ -0.01
LRFN1-201ENST00000248668 TANKQ92844 425 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 GTPBP3Q969Y2 492 aaKnown RBP15.02□□□□□ -0.01
LRFN1-201ENST00000248668 LYVE1Q9Y5Y7 322 aa15.02□□□□□ -0.01
LRFN1-201ENST00000248668 TRBV23OR9-2A0A075B6M9 112 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 TMPRSS11DO60235 418 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 PCDHGA12O60330 932 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 MT-ND2P03891 347 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 BCHEP06276 602 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 RYKP34925 604 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 KRT20P35900 424 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 ITGADQ13349 1161 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 TP53BP2Q13625 1128 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 SPCS2Q15005 226 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 IFI44LQ53G44 452 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 PIWIL3Q7Z3Z3 882 aaKnown RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 LSRQ86X29 649 aaPredicted RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 SETD9Q8NE22 299 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 NIPSNAP1Q9BPW8 284 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF717Q9BY31 904 aaPredicted RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 FBXL12Q9NXK8 326 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 GDE1Q9NZC3 331 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 CA5BQ9Y2D0 317 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 CORINQ9Y5Q5 1042 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 NUP210Q8TEM1 1887 aaPredicted RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 SNRNP200O75643 2136 aaKnown RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 KDM1AO60341 852 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 JRKO75564 520 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 APODP05090 189 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 PCSK2P16519 638 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 CCR8P51685 355 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 AQP6Q13520 282 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 DUSP7Q16829 419 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM31Q5JXX7 168 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 RD3Q7Z3Z2 195 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 UBE2Q1Q7Z7E8 422 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 ALDH16A1Q8IZ83 802 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 OR10G2Q8NGC3 310 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 APOL4Q9BPW4 351 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 NLNQ9BYT8 704 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 GABARAPL1Q9H0R8 117 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 PCDHGB3Q9Y5G1 929 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 A0A1W2PPV9 198 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 TOR1BO14657 336 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 HNRNPFP52597 415 aaKnown RBP15.01□□□□□ -0.01
LRFN1-201ENST00000248668 ARPC4P59998 168 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 SGCGQ13326 291 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 LGI4Q8N135 537 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 HORMAD2Q8N7B1 307 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 RAB7BQ96AH8 199 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 TM4SF18Q96CE8 201 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 CXorf40BQ96DE9 158 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 DOK1Q99704 481 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 MS4A8Q9BY19 250 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 CDH7Q9ULB5 785 aa15.01□□□□□ -0.01
LRFN1-201ENST00000248668 A0A1W2PQU0 124 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 PCDH17O14917 1159 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 KMOO15229 486 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 BCL10O95999 233 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 BSGP35613 385 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 ERVK-21P61565 698 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 CLCA4Q14CN2 919 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 ZC3H12BQ5HYM0 836 aaKnown RBP15□□□□□ -0.01
LRFN1-201ENST00000248668 OXR1Q8N573 874 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 SMPDL3AQ92484 453 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 TUBA1CQ9BQE3 449 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 NKX2-4Q9H2Z4 354 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms