RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CNR2P34972 360 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 LRRC26Q2I0M4 334 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 GEMIN6Q8WXD5 167 aaKnown RBP24.36■■□□□ 1.49
RAB40C-201ENST00000248139 RSPRY1Q96DX4 576 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 TMEM38AQ9H6F2 299 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 NMNAT1Q9HAN9 279 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-201ENST00000248139 TBC1D14Q9P2M4 693 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 DKK3Q9UBP4 350 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 TAC3Q9UHF0 121 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 NUMA1Q14980 2115 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 METTL15A6NJ78 407 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 PLPP1O14494 284 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 DSTNP60981 165 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 PRAMEF14Q5SWL7 426 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 PRAMEF13Q5VWM6 474 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 DOCK9Q9BZ29 2069 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 PPM1DO15297 605 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 CCNB2O95067 398 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 ARAFP10398 606 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 CHMP24386 653 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 OPRD1P41143 372 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 EIF2DP41214 584 aaKnown RBP24.35■■□□□ 1.49
RAB40C-201ENST00000248139 PCBP3P57721 371 aaKnown RBP24.35■■□□□ 1.49
RAB40C-201ENST00000248139 SZRD1Q7Z422 152 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 TAGAPQ8N103 731 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 CXorf40BQ96DE9 158 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 CDADC1Q9BWV3 514 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 THSD1Q9NS62 852 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 PLCXD1Q9NUJ7 323 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 FKBP14Q9NWM8 211 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 SCHIP1Q9P0W5 487 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-201ENST00000248139 HCN4Q9Y3Q4 1203 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 SH3BP5O60239 455 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 B4GALT2O60909 372 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 PPP5CP53041 499 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 CRB2Q5IJ48 1285 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 MRPL43Q8N983 215 aaKnown RBP24.35■■□□□ 1.49
RAB40C-201ENST00000248139 SLC38A5Q8WUX1 472 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 ENPP4Q9Y6X5 453 aa24.35■■□□□ 1.49
RAB40C-201ENST00000248139 RBBP4Q09028 425 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 FNDC3BQ53EP0 1204 aaKnown RBP24.34■■□□□ 1.49
RAB40C-201ENST00000248139 CELF5Q8N6W0 485 aaKnown RBP24.34■■□□□ 1.49
RAB40C-201ENST00000248139 ANKRD53Q8N9V6 530 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 WDR34Q96EX3 536 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 TPST2O60704 377 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 PAPLNO95428 1278 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 ACADLP28330 430 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 RGS6P49758 472 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 SEC23BQ15437 767 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 ZNF630Q2M218 657 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-201ENST00000248139 PTCHD4Q6ZW05 846 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 SLC9B2Q86UD5 537 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 AMER3Q8N944 861 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 EXOSC8Q96B26 276 aaKnown RBP24.34■■□□□ 1.49
RAB40C-201ENST00000248139 TMEM165Q9HC07 324 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 CXXC1Q9P0U4 656 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-201ENST00000248139 IFT52Q9Y366 437 aa24.34■■□□□ 1.49
RAB40C-201ENST00000248139 ADH5P11766 374 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 MAGEA10P43363 369 aaPredicted RBP24.33■■□□□ 1.49
RAB40C-201ENST00000248139 MANFP55145 182 aaKnown RBP24.33■■□□□ 1.49
RAB40C-201ENST00000248139 CSNK2BP67870 215 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 FAM210AQ96ND0 272 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 NLNQ9BYT8 704 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 SAGE1Q9NXZ1 904 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 MAPRE3Q9UPY8 281 aa24.33■■□□□ 1.49
RAB40C-201ENST00000248139 MRPS14O60783 128 aaKnown RBP24.33■■□□□ 1.48
RAB40C-201ENST00000248139 IFNW1P05000 195 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 RPLP0P05388 317 aaKnown RBP24.33■■□□□ 1.48
RAB40C-201ENST00000248139 CKMT1AP12532 417 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 ITGA2P17301 1181 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 CBLP22681 906 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 LIMS1P48059 325 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 EPHA5P54756 1037 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 TSTQ16762 297 aaKnown RBP24.33■■□□□ 1.48
RAB40C-201ENST00000248139 STEAP3Q658P3 488 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 CCDC80Q76M96 950 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 C11orf96Q7Z7L8 435 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 ARMC8Q8IUR7 673 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 LYSMD2Q8IV50 215 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 FAM20CQ8IXL6 584 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 GPR32P1Q8NGA4 272 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 POF1BQ8WVV4 589 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 FCGR1BQ92637 280 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 COL21A1Q96P44 957 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 ANGPT4Q9Y264 503 aa24.33■■□□□ 1.48
RAB40C-201ENST00000248139 PTPRSQ13332 1948 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 H7BY64 318 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 BCL7AQ4VC05 210 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 NRSN1Q8IZ57 195 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 CYP4Z2PQ8N1L4 340 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 OR4D11Q8NGI4 311 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 TMEM19Q96HH6 336 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 PRAP1Q96NZ9 151 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 LTBP2Q14767 1821 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 ZW10O43264 779 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 AQP9O43315 295 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 SPNP16150 400 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 LSM11P83369 360 aaKnown RBP eCLIP24.32■■□□□ 1.48
RAB40C-201ENST00000248139 TPRG1LQ5T0D9 272 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 MMAAQ8IVH4 418 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms