RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 DSN1Q9H410 356 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 MRPS30Q9NP92 439 aaKnown RBP13.12□□□□□ -0.31
NCLN-201ENST00000246117 IL1RAPQ9NPH3 570 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 CACNB4O00305 520 aaPredicted RBP13.12□□□□□ -0.31
NCLN-201ENST00000246117 ARNTLO00327 626 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 PRMT3O60678 531 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
NCLN-201ENST00000246117 CCR8P51685 355 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 SMIM11AP58511 58 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 ZNF761Q86XN6 746 aaPredicted RBP13.12□□□□□ -0.31
NCLN-201ENST00000246117 GPR151Q8TDV0 419 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
NCLN-201ENST00000246117 KLHL6Q8WZ60 621 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 PTPRFP10586 1907 aa13.12□□□□□ -0.31
NCLN-201ENST00000246117 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 C1SP09871 688 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 CA5AP35218 305 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 SLC9A3P48764 834 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 PNLIPRP1P54315 467 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 KCNC4Q03721 635 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 HOMEZQ8IX15 550 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 SPATA5L1Q9BVQ7 753 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CARD8Q9Y2G2 431 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 C2orf92A0A1B0GVN3 265 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 FAM170BA6NMN3 283 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 WASHC1A8K0Z3 465 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 C1QCP02747 245 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 FUCA1P04066 466 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 PGDP52209 483 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 RAB33AQ14088 237 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 MAD2L1BPQ15013 274 aaPredicted RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 LIPJQ5W064 366 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 MARCH9Q86YJ5 346 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 OMA1Q96E52 524 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 SOHLH2Q9NX45 425 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 SOX30O94993 753 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 NFATC1O95644 943 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CRISP3P54108 245 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CAV3P56539 151 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 TMEM31Q5JXX7 168 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CPPED1Q9BRF8 314 aaPredicted RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 WACQ9BTA9 647 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 STMN3Q9NZ72 180 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 CNIH4Q9P003 139 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
NCLN-201ENST00000246117 ZFC3H1O60293 1989 aaKnown RBP13.11□□□□□ -0.31
NCLN-201ENST00000246117 RETP07949 1114 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 CR2P20023 1033 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 SLC19A1P41440 591 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 DHCR24Q15392 516 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 LRR1Q96L50 414 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 VNN3Q9NY84 501 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 LY75O60449 1722 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 TMEM189-UBE2V1I3L0A0 370 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 K7ESM1 405 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 ZNF30P17039 623 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 TYRP1P17643 537 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 DEFB134Q4QY38 66 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 C11orf88Q6PI97 169 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR51L1Q8NGJ5 315 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR6K6Q8NGW6 343 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.31
NCLN-201ENST00000246117 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 TTYH2Q9BSA4 534 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 IFT27Q9BW83 186 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms