RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 COL21A1Q96P44 957 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 C6orf62Q9GZU0 229 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 OR51E2Q9H255 320 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 MMP27Q9H306 513 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 MS4A12Q9NXJ0 267 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PLAGL1Q9UM63 463 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 HCN4Q9Y3Q4 1203 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 SNX8Q9Y5X2 465 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PLK4O00444 970 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 CCNB2O95067 398 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 RPLP0P05388 317 aaKnown RBP13.72□□□□□ -0.21
HIF3A-202ENST00000244303 ADH5P11766 374 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 CBLP22681 906 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 HMGA2P52926 109 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 DSTNP60981 165 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 ST8SIA6P61647 398 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 TEKQ02763 1124 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 DUSP7Q16829 419 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 COLEC12Q5KU26 742 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 C12orf40Q86WS4 652 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 CELF5Q8N6W0 485 aaKnown RBP13.72□□□□□ -0.21
HIF3A-202ENST00000244303 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 B3GNT7Q8NFL0 401 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 PSD2Q9BQI7 771 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 YIPF2Q9BWQ6 316 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF229Q9UJW7 825 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 ENPP4Q9Y6X5 453 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
HIF3A-202ENST00000244303 DSCR3O14972 297 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 POP7O75817 140 aaKnown RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ACADLP28330 430 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PCYT1AP49585 367 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 MESP2Q0VG99 397 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RPS26P11Q5JNZ5 115 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PRAMEF14Q5SWL7 426 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PRAMEF13Q5VWM6 474 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PSRC1Q6PGN9 363 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 TMIGD1Q6UXZ0 262 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ACAT2Q9BWD1 397 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ZDHHC5Q9C0B5 715 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ABCB10Q9NRK6 738 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RBMX2Q9Y388 322 aaKnown RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 CFAP20Q9Y6A4 193 aaKnown RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 FAM227AF5H4B4 570 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PI15O43692 258 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PAPLNO95428 1278 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 GASTP01350 101 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ADRA2AP08913 450 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 HSMCR30P0CW71 290 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 C6P13671 934 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RHCEP18577 417 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 UQCRC2P22695 453 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 DGKEP52429 567 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 CDC42P60953 191 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RPS26P62854 115 aaKnown RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 IRF3Q14653 427 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 FBXO43Q4G163 708 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 KLHL17Q6TDP4 642 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 IKBIPQ70UQ0 350 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 ARRDC3Q96B67 414 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 NRTNQ99748 197 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 NLNQ9BYT8 704 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 NMNAT1Q9HAN9 279 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 RWDD3Q9Y3V2 267 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PRKAB1Q9Y478 270 aa13.71□□□□□ -0.21
HIF3A-202ENST00000244303 PCYT1BQ9Y5K3 369 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-202ENST00000244303 AGAP5A6NIR3 686 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 MMP20O60882 483 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 UPK1BO75841 260 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-202ENST00000244303 PRNPP04156 253 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 IFNW1P05000 195 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 SERPINB1P30740 379 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 VIPR2P41587 438 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 RGS6P49758 472 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 PUM1Q14671 1186 aaKnown RBP eCLIP13.7□□□□□ -0.22
HIF3A-202ENST00000244303 EIF4HQ15056 248 aaKnown RBP13.7□□□□□ -0.22
HIF3A-202ENST00000244303 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 FAM83HQ6ZRV2 1179 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-202ENST00000244303 SLC9B2Q86UD5 537 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 OR5AR1Q8NGP9 310 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 UBE2E3Q969T4 207 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 CHCHD6Q9BRQ6 235 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 CENPOQ9BU64 300 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 CDADC1Q9BWV3 514 aa13.7□□□□□ -0.22
HIF3A-202ENST00000244303 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms