RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 NSUN5Q96P11 429 aaKnown RBP16.94■□□□□ 0.3
PFN1-201ENST00000225655 CENPKQ9BS16 269 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 OLAHQ9NV23 265 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 TRPS1Q9UHF7 1281 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 SNX6Q9UNH7 406 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 NAALAD2Q9Y3Q0 740 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 ZGRF1Q86YA3 2104 aa16.94■□□□□ 0.3
PFN1-201ENST00000225655 OR7A17O14581 309 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 NPHS1O60500 1241 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 SEC24DO94855 1032 aaPredicted RBP16.93■□□□□ 0.3
PFN1-201ENST00000225655 SNUPNO95149 360 aaKnown RBP16.93■□□□□ 0.3
PFN1-201ENST00000225655 WDPCPO95876 746 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 ENO1P06733 434 aaKnown RBP16.93■□□□□ 0.3
PFN1-201ENST00000225655 GRK2P25098 689 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 IFT88Q13099 833 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 E2F2Q14209 437 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 ZNF324BQ6AW86 544 aaPredicted RBP16.93■□□□□ 0.3
PFN1-201ENST00000225655 PLAG1Q6DJT9 500 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 LANCL3Q6ZV70 420 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 SHISA5Q8N114 240 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 OR52B6Q8NGF0 335 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 MECRQ9BV79 373 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 GSTO2Q9H4Y5 243 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 ELOVL6Q9H5J4 265 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 TEKT2Q9UIF3 430 aa16.93■□□□□ 0.3
PFN1-201ENST00000225655 IGHV3-20A0A0C4DH32 117 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 H0YIV9 168 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 RDH16O75452 317 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 CLEC3AO75596 197 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 KRT6AP02538 564 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 KRT6BP04259 564 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 SERPINE1P05121 402 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 KRT6CP48668 564 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 STXBP1P61764 594 aaKnown RBP16.92■□□□□ 0.3
PFN1-201ENST00000225655 TGM3Q08188 693 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 TRAF3Q13114 568 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 HERC3Q15034 1050 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 CPSF6Q16630 551 aaKnown RBP eCLIP16.92■□□□□ 0.3
PFN1-201ENST00000225655 NIPAL1Q6NVV3 410 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 ANKRD37Q7Z713 158 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.92■□□□□ 0.3
PFN1-201ENST00000225655 LAS2Q8IYD9 372 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 AFAP1L2Q8N4X5 818 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 OR4F6Q8NGB9 312 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 OR1F2PQ96R84 312 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 TAAR6Q96RI8 345 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 GATA5Q9BWX5 397 aaPredicted RBP16.92■□□□□ 0.3
PFN1-201ENST00000225655 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.92■□□□□ 0.35e-7■□□□□ 11
PFN1-201ENST00000225655 ZBTB26Q9HCK0 441 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 MID1IP1Q9NPA3 183 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 STMN3Q9NZ72 180 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 OSGIN2Q9Y236 505 aa16.92■□□□□ 0.3
PFN1-201ENST00000225655 DIDO1Q9BTC0 2240 aaKnown RBP16.91■□□□□ 0.3
PFN1-201ENST00000225655 A0A088AWK7 358 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 WDR91A4D1P6 747 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 OR5H15A6NDH6 313 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 OR2W5A6NFC9 320 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 TMEM114B3SHH9 223 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ESRRBO95718 433 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 CHEK2O96017 543 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 F10P00742 488 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 SERPINA6P08185 405 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 DHRS4L1P0CG22 281 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 TSPAN8P19075 237 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ZNF10P21506 573 aaPredicted RBP16.91■□□□□ 0.3
PFN1-201ENST00000225655 HMOX2P30519 316 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 PIK3CBP42338 1070 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 PPP2R2AP63151 447 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ZNF33BQ06732 778 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 RCN2Q14257 317 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
PFN1-201ENST00000225655 CHI3L2Q15782 390 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 BTBD16Q32M84 506 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 H3F3CQ6NXT2 135 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ABHD13Q7L211 337 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 AMER2Q8N7J2 671 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 NT5CQ8TCD5 201 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 DYDC1Q8WWB3 177 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 NR4A3Q92570 626 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 CDK15Q96Q40 435 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 RHBGQ9H310 441 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 RNF11Q9Y3C5 154 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 TSC22D4Q9Y3Q8 395 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 TEX15Q9BXT5 2789 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 NOTCH2Q04721 2471 aa16.91■□□□□ 0.3
PFN1-201ENST00000225655 MAGEB17A8MXT2 336 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 LRRTM2O43300 516 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 GALR3O60755 368 aaPredicted RBP16.9■□□□□ 0.3
PFN1-201ENST00000225655 HSPA4LO95757 839 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 STSP08842 583 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 CD22P20273 847 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 TDGF1P3P51864 188 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 PER3P56645 1201 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 RHAGQ02094 409 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms