RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TUBA3EQ6PEY2 450 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 OR4K17Q8NGC6 315 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SETD7Q8WTS6 366 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 MOAP1Q96BY2 351 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SFXN1Q9H9B4 322 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 KLRF1Q9NZS2 232 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 IL17CQ9P0M4 197 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SPO11Q9Y5K1 396 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 VILLO15195 856 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 PIM1P11309 404 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 C6P13671 934 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 KCNC1P48547 511 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HTR6P50406 440 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 OR2B6P58173 313 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 ADAM17P78536 824 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 MARVELD2Q8N4S9 558 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 GATA6Q92908 595 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 B3GNT4Q9C0J1 378 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 CCDC59Q9P031 241 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 DOCK1Q14185 1865 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 C2orf74A8MZ97 194 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 RTCAO00442 366 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 CLPXO76031 633 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 ZNF20P17024 532 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SLC6A6P31641 620 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 MLLT1Q03111 559 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 ST3GAL4Q11206 333 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SLAMF1Q13291 335 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 MAPK14Q16539 360 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 PIGGQ5H8A4 983 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 RAB41Q5JT25 222 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SH2D5Q6ZV89 423 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 C12orf40Q86WS4 652 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 TCEAL8Q8IYN2 117 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 DEFB119Q8N690 84 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HUS1BQ8NHY5 278 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HSPBAP1Q96EW2 488 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 MMABQ96EY8 250 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 TMEM80Q96HE8 168 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 BARD1Q99728 777 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 PCTPQ9UKL6 214 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 LIPT1Q9Y234 373 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HMX2A2RU54 273 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 PROM1O43490 865 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 ZNF821O75541 412 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 CTSAP10619 480 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 GP1BBP13224 206 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 HK1P19367 917 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 S100A1P23297 94 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 BMPR1AP36894 532 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SLC6A9P48067 706 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 POU6F2P78424 691 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 DSG2Q14126 1118 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 CATSPEREQ5SY80 951 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 CRTC1Q6UUV9 634 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 HACD2Q6Y1H2 254 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SLC39A5Q6ZMH5 540 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 ASPGQ86U10 573 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 C3orf58Q8NDZ4 430 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 BBS10Q8TAM1 723 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.04□□□□□ -0.64
NOD1-201ENST00000222823 THEM6Q8WUY1 208 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SH3YL1Q96HL8 342 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 RBCK1Q9BYM8 510 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 CHMP1AQ9HD42 196 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 A0A1W2PRG6 482 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 KLHL33A6NCF5 533 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 OR5K4A6NMS3 321 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SRCP12931 536 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 ZNF182P17025 639 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 C1orf61Q13536 156 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 RUNX3Q13761 415 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 ZNF423Q2M1K9 1284 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 WSCD2Q2TBF2 565 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 C6orf120Q7Z4R8 191 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SCML4Q8N228 414 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 CHST14Q8NCH0 376 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 BADQ92934 168 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 PTCHD1Q96NR3 888 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 GTPBP2Q9BX10 602 aaKnown RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 IL26Q9NPH9 171 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 IFT52Q9Y366 437 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SIPA1L1O43166 1804 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms