RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 EFNA3P52797 238 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 HNRNPH2P55795 449 aaKnown RBP22.25■■□□□ 1.15
HOMER3-201ENST00000221222 TMPRSS3P57727 454 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 RAE1P78406 368 aaKnown RBP22.25■■□□□ 1.15
HOMER3-201ENST00000221222 BTKQ06187 659 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 ERV3-1Q14264 604 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 KIAA0040Q15053 153 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 NR6A1Q15406 480 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 UGT8Q16880 541 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 CCNYL2Q5T2Q4 361 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 GPR180Q86V85 440 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 ZSCAN1Q8NBB4 408 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 FAM76AQ8TAV0 307 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 C3orf30Q96M34 536 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 CSF3RQ99062 836 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 RBCK1Q9BYM8 510 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 VN1R1Q9GZP7 353 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 C1orf109Q9NX04 203 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 FBXW2Q9UKT8 454 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 MKL2Q9ULH7 1088 aa22.25■■□□□ 1.15
HOMER3-201ENST00000221222 FAM227AF5H4B4 570 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 SLCO1B7G3V0H7 640 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 K7ENP7 123 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 C1QL1O75973 258 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 IGHEP01854 428 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 HEXBP07686 556 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 TIA1P31483 386 aaKnown RBP eCLIP22.24■■□□□ 1.15
HOMER3-201ENST00000221222 HK2P52789 917 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 EMP2P54851 167 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 PDCD2Q16342 344 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-201ENST00000221222 MINDY4Q4G0A6 757 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 INO80CQ6PI98 192 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-201ENST00000221222 CRLF3Q8IUI8 442 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 ZNF595Q8IYB9 648 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 PLPP5Q8NEB5 264 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 PIWIL2Q8TC59 973 aaKnown RBP22.24■■□□□ 1.15
HOMER3-201ENST00000221222 LRTM1Q9HBL6 345 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 SLCO1B3Q9NPD5 702 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 RIC8BQ9NVN3 520 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 MRPS33Q9Y291 106 aaKnown RBP22.24■■□□□ 1.15
HOMER3-201ENST00000221222 ATG4BQ9Y4P1 393 aa22.24■■□□□ 1.15
HOMER3-201ENST00000221222 BLACEA4D250 179 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 PCDH17O14917 1159 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 NKX2-8O15522 239 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 PROM1O43490 865 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 KALRNO60229 2985 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 PCDH7O60245 1069 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 B4GALT2O60909 372 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 CDC123O75794 336 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-201ENST00000221222 CPN2P22792 545 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 MMP11P24347 488 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 MAPK12P53778 367 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 TRA2BP62995 288 aaKnown RBP22.23■■□□□ 1.15
HOMER3-201ENST00000221222 RHAGQ02094 409 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 TNFRSF17Q02223 184 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 QSOX2Q6ZRP7 698 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 EFCAB3Q8N7B9 438 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 FAM47BQ8NA70 645 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 TMEM52Q8NDY8 209 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 SNRNP27Q8WVK2 155 aaKnown RBP22.23■■□□□ 1.15
HOMER3-201ENST00000221222 FCRL1Q96LA6 429 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 PPP3R2Q96LZ3 170 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 VTI1BQ9UEU0 232 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 MMACHCQ9Y4U1 282 aa22.23■■□□□ 1.15
HOMER3-201ENST00000221222 HDAC3O15379 428 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 GUCY1B2O75343 617 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 SEC22BO75396 215 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 BUD31P41223 144 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-201ENST00000221222 HNRNPFP52597 415 aaKnown RBP22.22■■□□□ 1.15
HOMER3-201ENST00000221222 HSD17B7P56937 341 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 VAC14Q08AM6 782 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 MFSD4BQ5TF39 518 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 RAB43Q86YS6 212 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 MEAF6Q9HAF1 191 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 MARCOQ9UEW3 520 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-201ENST00000221222 TMED5Q9Y3A6 229 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 HS3ST3B1Q9Y662 390 aa22.22■■□□□ 1.15
HOMER3-201ENST00000221222 ATP6AP2A0A1C7CYW4 349 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 A0A1W2PR48 441 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 CLDN4O14493 209 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 PRMT3O60678 531 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 ALOX12BO75342 701 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 ATP6AP2O75787 350 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 FURINP09958 794 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 TLX1P31314 330 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-201ENST00000221222 GSTM5P46439 218 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 C19orf57Q0VDD7 668 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 CDC20Q12834 499 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 RFTN2Q52LD8 501 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-201ENST00000221222 NOXRED1Q6NXP6 359 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 TMEM205Q6UW68 189 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 PPP1R32Q7Z5V6 425 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 SCUBE1Q8IWY4 988 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 IP6K3Q96PC2 410 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 NUF2Q9BZD4 464 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 PRDM9Q9NQV7 894 aa22.21■■□□□ 1.15
HOMER3-201ENST00000221222 IGKV3D-11A0A0A0MRZ8 115 aa22.2■■□□□ 1.14
HOMER3-201ENST00000221222 GNG14A0A1W2PPG7 69 aa22.2■■□□□ 1.14
HOMER3-201ENST00000221222 OR2W5A6NFC9 320 aa22.2■■□□□ 1.14
HOMER3-201ENST00000221222 MYO1DO94832 1006 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms