RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 GINS1Q14691 196 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 KCTD11Q693B1 232 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CCDC36Q8IYA8 594 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 KLHL36Q8N4N3 616 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 OR9Q2Q8NGE9 314 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 MAFAQ8NHW3 353 aaPredicted RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 LINC01599Q8WXQ3 324 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 RAB8BQ92930 207 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 UBE2FQ969M7 185 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ISL2Q96A47 359 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 UBXN10Q96LJ8 280 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 C12orf66Q96MD2 445 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 YIPF4Q9BSR8 244 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 FXYD6Q9H0Q3 95 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ZCCHC3Q9NUD5 404 aaKnown RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 A0A0G2JPF8 293 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HNRNPCL3B7ZW38 293 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 QSOX1O00391 747 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 PRAMEF11O60813 436 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 EPHX1P07099 455 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 RPS17P08708 135 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HNRNPCL4P0DMR1 293 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 MAGEA12P43365 314 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 CRISP1P54107 249 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 CXCR4P61073 352 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 TGM3Q08188 693 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 AQP6Q13520 282 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 ANKRD34AQ69YU3 496 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 C17orf64Q86WR6 236 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SLITRK4Q8IW52 837 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 UMODL1-AS1Q8N2C9 162 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SAMD12Q8N8I0 201 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 PIGXQ8TBF5 258 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 TTLL2Q9BWV7 592 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SFXN1Q9H9B4 322 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 TDP1Q9NUW8 608 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 MED11Q9P086 117 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 FNIP2Q9P278 1114 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 ABCD2Q9UBJ2 740 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SPACA6W5XKT8 324 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 NFATC1O95644 943 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HOXD8P13378 290 aaPredicted RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 FAUP35544 74 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 OLFML2AQ68BL7 652 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 RAET1GQ6H3X3 334 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 RNF130Q86XS8 419 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 GTF2H4Q92759 462 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HDHD5Q9BXW7 423 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 TNFRSF12AQ9NP84 129 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 TMEM248Q9NWD8 314 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 GPRC5BQ9NZH0 403 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HCN3Q9P1Z3 774 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 YBX2Q9Y2T7 364 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 CLDN24A6NM45 220 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HCN1O60741 890 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 CPNE6O95741 557 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SRPRAP08240 638 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 HRH2P25021 359 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 LCN1P31025 176 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 EIF2DP41214 584 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 MLLT10P55197 1068 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 PPP3R1P63098 170 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SLC3A1Q07837 685 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 SELENBP1Q13228 472 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 PM20D1Q6GTS8 502 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 MRPL10Q7Z7H8 261 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 IGSF8Q969P0 613 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 UHRF1Q96T88 793 aaPredicted RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 MGAT4AQ9UM21 535 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 ZFR2Q9UPR6 939 aaKnown RBP11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 NOX1Q9Y5S8 564 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
DNMT3B-201ENST00000201963 A0A0U1RQS6 177 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 ARNTLO00327 626 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 EEF1E1O43324 174 aaKnown RBP11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 GPR1P46091 355 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 CCR4P51679 360 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 SMSP52788 366 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 GP2P55259 537 aaKnown RBP11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 AP3S2P59780 193 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 MGAT3Q09327 533 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 CFAP206Q8IYR0 622 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 CPA6Q8N4T0 437 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 ADAMTS15Q8TE58 950 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 FUBP3Q96I24 572 aaKnown RBP eCLIP11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 NECTIN4Q96NY8 510 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 GAL3ST1Q99999 423 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 CENPOQ9BU64 300 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 AMBRA1Q9C0C7 1298 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 UBQLN2Q9UHD9 624 aa11.06□□□□□ -0.64
DNMT3B-201ENST00000201963 C2orf92A0A1B0GVN3 265 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms