RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 SMU1Q2TAY7 513 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 SHQ1Q6PI26 577 aaKnown RBP12.54□□□□□ -0.4
HDAC7-201ENST00000080059 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 ZNF761Q86XN6 746 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-201ENST00000080059 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 TRIM43Q96BQ3 446 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-201ENST00000080059 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 CLMPQ9H6B4 373 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 DCAF13Q9NV06 445 aaKnown RBP12.54□□□□□ -0.4
HDAC7-201ENST00000080059 RIIAD1A6NNX1 92 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 CD72P21854 359 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 PSMB5P28074 263 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 CCR2P41597 374 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 HLCSP50747 726 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 COX10Q12887 443 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 OR4K14Q8NGD5 310 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 PMEPA1Q969W9 287 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 DIRAS2Q96HU8 199 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 KCNS3Q9BQ31 491 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 UBAP1Q9NZ09 502 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 TMEM202A6NGA9 273 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 MAP2K4P45985 399 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 VBP1P61758 197 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 NDUFAF5Q5TEU4 345 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 OR10H4Q8NGA5 316 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 OR52N2Q8NGI0 321 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 TMEM19Q96HH6 336 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 ZNF583Q96ND8 569 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 ABCG4Q9H172 646 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 MVB12BQ9H7P6 319 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 DMRT3Q9NQL9 472 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 ERVK-18Q9QC07 812 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
HDAC7-201ENST00000080059 A8MU76 341 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 OR5F1O95221 314 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MYF6P23409 242 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 RNF144AP50876 292 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 VSX2P58304 361 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 SIM1P81133 766 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 OR52E8Q6IFG1 317 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 TMEM107Q6UX40 140 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 NCSTNQ92542 709 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MAPKAP1Q9BPZ7 522 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 OSBPL10Q9BXB5 764 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 PAK6Q9NQU5 681 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 PCDHA9Q9Y5H5 950 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 SLC22A1O15245 554 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 APOL3O95236 402 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 AK4P27144 223 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MVKQ03426 396 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ST3GAL4Q11206 333 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 IL18R1Q13478 541 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 DDI2Q5TDH0 399 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ZNF248Q8NDW4 579 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 IL1RAPQ9NPH3 570 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 STMN3Q9NZ72 180 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 IKZF2Q9UKS7 526 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 BRWD1Q9NSI6 2320 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 GPR37L1O60883 481 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 REM1O75628 298 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 IL1RNP18510 177 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MYL9P24844 172 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 SRP54P61011 504 aaKnown RBP12.53□□□□□ -0.4
HDAC7-201ENST00000080059 TAP2Q03519 686 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 RPA4Q13156 261 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ASPGQ86U10 573 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 ATP6V1C2Q8NEY4 427 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 HSPBAP1Q96EW2 488 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 DEPDC7Q96QD5 511 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 MCHR1Q99705 422 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 FAM83CQ9BQN1 747 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 TSSK6Q9BXA6 273 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
HDAC7-201ENST00000080059 IRGMA1A4Y4 181 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 H3BNC9 293 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 HAT1O14929 419 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 MT-ND2P03891 347 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 NUDT7P0C024 238 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 MMP12P39900 470 aa12.52□□□□□ -0.4
HDAC7-201ENST00000080059 OR4C11Q6IEV9 310 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms