RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 ChadlE9Q7T7 748 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gm16434J3QN10 205 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 4930555G01RikL7N253 205 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Il6raP22272 460 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Cln6Q3U466 308 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Lsmem1Q3UQS2 128 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Slc39a12Q5FWH7 689 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Krtcap2Q5RL79 136 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Grb10Q60760 621 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gata6Q61169 589 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Mon1bQ8BMQ8 553 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Arl2Q9D0J4 184 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ankrd34aB2RW11 495 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Vmn2r22E9Q7S8 853 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gm10338K7N692 204 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 CtsdP18242 410 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Capza1P47753 286 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Grid2Q61625 1007 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Lasp1Q61792 263 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Pan3Q640Q5 837 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Tmem62Q8BXJ9 643 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Calhm4Q8CE93 315 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Olfr63Q8VBW9 316 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Vmn1r69Q8VIC1 319 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Rpl4Q9D8E6 419 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Mbd3l1Q9D9H3 186 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 PikfyveQ9Z1T6 2097 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Olfr1153A2AVC0 318 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Mtnd5P03921 607 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Bpifa1P97361 278 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Zbtb48Q1H9T6 681 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gdpgp1Q3TLS3 386 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Q3UTZ3 580 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gm11992Q5SS90 291 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Slc5a10Q5SWY8 596 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Foxd3Q61060 465 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Map4k2Q61161 821 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 MogsQ80UM7 834 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Kcng4Q80XM3 506 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Commd7Q8BG94 200 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Isoc1Q91V64 297 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ptbp2Q91Z31 531 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Atg12Q9CQY1 141 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ints12Q9D168 461 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 P33monoxQ9DBN4 303 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Xrn2Q9DBR1 951 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 PrepQ9QUR6 710 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Scnn1gQ9WU39 655 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Trappc13Q3TIR1 417 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Snx33Q4VAA7 574 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Phf12Q5SPL2 1003 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Slc5a6Q5U4D8 634 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Guk1Q64520 198 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Pwwp2aQ69Z61 730 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ppp1r1cQ8BKK4 108 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Fastkd3Q8BSN9 661 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Grsf1Q8C5Q4 479 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Rbm48Q8K2X2 371 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Tspan33Q8R3S2 283 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Scpep1Q920A5 452 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Eral1Q9CZU4 437 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Hm13Q9D8V0 378 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Fbxo17Q9QZM8 286 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Fam136b-psA0A140T8T1 138 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ssxa1B1AUS7 101 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gm10479K7N6H4 105 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Pld3O35405 488 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 RngttO55236 597 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Cfl1P18760 166 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Zdhhc11Q14AK4 347 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Tgfbr2Q62312 592 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Cnih3Q6ZWS4 160 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Asb15Q8VHS6 583 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Spaca1Q9DA48 305 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Cdc40Q9DC48 579 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Akr1e2Q9DCT1 301 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 BvesQ9ES83 358 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Herpud2Q9JJC9 404 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 RhagQ9QUT0 438 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Col5a2Q3U962 1497 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Vmn2r85G3UW56 850 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Obox6G3X9U1 347 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Mab21l1O70299 359 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Arpc4P59999 168 aaKnown RBP6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Paqr3Q6TCG8 311 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Oxa1lQ8BGA9 433 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Gpc2Q8BKV1 579 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Tmem98Q91X86 226 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Dhrs7bQ99J47 323 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 4933421I07RikQ9D420 214 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Cypt12Q9DAR6 119 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 D7h11orf16Q9JJR6 402 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Smok4aA0JLX3 433 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Crisp4E9PVG4 293 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Enpp1P06802 906 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Zp2P20239 713 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Ppp3r2Q63811 179 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Tvp23aQ6NVH0 222 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 AftphQ80WT5 931 aa6.5□□□□□ -1.37
Scn8a-205ENSMUST00000108910 Slc30a6Q8BJM5 460 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms