RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 CremP27699 357 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pabpc1P29341 636 aaKnown RBP9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sox3P53784 375 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gfi1P70338 423 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ptpn2Q06180 406 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm136Q3V037 328 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Spag8Q3V0Q6 470 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Prss36Q5K2P8 849 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Orm1Q60590 207 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dalrd3Q6PJN8 538 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ppp1r3eQ8BRJ4 279 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 PigzQ8BTP0 560 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Steap2Q8BWB6 489 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Stfa2l1Q8BWM3 103 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam46bQ8C152 427 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MmaaQ8C7H1 415 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Adgrg1Q8K209 687 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Macrod1Q922B1 323 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tex13bQ99MW5 186 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm26657Q9CVR1 127 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Isoc2bQ9DCC7 210 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pard6gQ9JK84 382 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Spry1Q9QXV9 313 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Irs2P81122 1321 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr396-ps1A0A0U1RNF5 211 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ccdc7bE9Q9Y3 381 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Btg4O70552 250 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cst3P21460 140 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cers1P27545 350 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rab8bP61028 207 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ChatQ03059 641 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Aldh16a1Q571I9 802 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1307Q7TQX1 312 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr384Q7TRX8 312 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ChdhQ8BJ64 596 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bnc2Q8BMQ3 1127 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 PxkQ8BX57 582 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nudt6Q8CH40 313 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Spp2Q8K1I3 203 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CenpiQ8K1K4 746 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atat1Q8K341 421 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam161aQ8QZV6 448 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Arrb2Q91YI4 410 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 AmnQ99JB7 458 aaKnown RBP9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zswim2Q9D9X6 631 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Exosc1Q9DAA6 195 aaKnown RBP9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Adam23Q9R1V7 829 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Loxl3Q9Z175 754 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tcf7l1Q9Z1J1 584 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr316A0A0N4SVP2 306 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm3696K7N751 203 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Emp3O35912 163 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Psma3O70435 255 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 AcadvlP50544 656 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atxn1P54254 791 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dusp5Q1HL35 384 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr681Q3SXH8 315 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr318Q5NCD7 306 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tas2r140Q7TQA4 312 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hamp2Q80T19 83 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CpmQ80V42 443 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MaobQ8BW75 520 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 RbksQ8R1Q9 323 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ak6Q8VCP8 172 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr818Q8VG46 318 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr679Q8VGV0 315 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 EsamQ925F2 394 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pbdc1Q9D0B6 198 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Xylt2Q9EPL0 865 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm43796A0A0J9YV32 372 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r9A2RST7 299 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ralgapa2A3KGS3 1872 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm2956E9PVJ0 216 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm5796E9Q7M8 205 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm7535F7CXE4 302 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm3629K7N6Y2 205 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm10340K7N708 205 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm8108K7N734 216 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ulk1O70405 1051 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 TpbpaP13438 124 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Srp54P14576 504 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Man2a1P27046 1150 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nsg2P47759 171 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ankdd1bQ14DN9 521 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tbc1d24Q3UUG6 561 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ddx5Q61656 614 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 PdgfrlQ6PE55 375 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q80Y39 304 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 PpcdcQ8BZB2 204 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dppa4Q8CCG4 296 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cfap61Q8CEL2 1252 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aoc1Q8JZQ5 751 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r215Q8R264 300 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r185Q8R299 319 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc9a8Q8R4D1 576 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr437Q8VEV1 310 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr666Q8VH00 318 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pex16Q91XC9 336 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Camk1Q91YS8 374 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aar2Q9D2V5 384 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms