RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ubl4aP21126 157 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pold1P52431 1105 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Il11ra2P70225 432 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Serpinf1P97298 417 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem102Q3UPR7 509 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 D13Ertd608eQ3UPR8 151 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Glb1l2Q3UPY5 636 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cox8aQ64445 69 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1045Q7TR80 315 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 AasdhQ80WC9 1100 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn1r38Q8R2E1 302 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Recql5Q8VID5 982 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem98Q91X86 226 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cts3Q91ZD5 332 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Acer3Q9D099 267 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Smok4aA0JLX3 433 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tbpl1P62340 186 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 InhaQ04997 366 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mdga1Q0PMG2 940 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr381Q5SSP0 311 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sec24dQ6NXL1 1032 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Oog2Q7TPX8 476 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cpne1Q8C166 536 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rfwd3Q8CIK8 774 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fads1Q920L1 447 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Atoh8Q99NA2 322 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ly6kQ9CWP4 154 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mau2Q9D2X5 619 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Lrrc69Q9D9Q0 347 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 VapaQ9WV55 249 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ltbp1Q8CG19 1712 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 1700001O22RikA2APZ1 375 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm11758A2BEI6 360 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm11757A2BEI8 360 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ccl26F8VQM2 93 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn1r176G3UW31 304 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gosr2O35166 212 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Prss36Q5K2P8 849 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Smarcd3Q6P9Z1 483 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp324Q78F42 583 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1085Q7TR64 313 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nudt15Q8BG93 170 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nipal3Q8BGN5 410 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Phf11aQ8BVM9 293 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 PigwQ8C398 503 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Phf21bQ8C966 487 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Oard1Q8R5F3 152 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pdcd10Q8VE70 212 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Plscr1Q9JJ00 328 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gpc6Q9R087 555 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Trim3Q9R1R2 744 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp978A2A7I1 335 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm8126E9Q1N7 198 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3594E9Q2A7 267 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm21800J3QMJ9 180 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 1700014D04RikJ3QMS2 983 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn2r8L7N472 848 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hmgn1P18608 96 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pcsk2P21661 637 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hsf2P38533 535 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pwwp2aQ69Z61 730 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rbm11Q80YT9 238 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Adgrg7Q8BM96 785 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gjc2Q8BQU6 440 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 C5ar2Q8BW93 344 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zbtb26Q8C8S0 451 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mterf3Q8R3J4 412 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc35b2Q91ZN5 431 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rab30Q923S9 203 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tpra1Q99MU1 369 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Smurf1Q9CUN6 731 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cytl1A1E5L0 139 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tgm7A2ART8 616 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn2r85G3UW56 850 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mknk1O08605 427 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gsta1P13745 223 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr6P34986 316 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Prdx1P35700 199 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Arhgef15Q5FWH6 849 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Crhr2Q60748 411 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tlx2Q61663 284 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pcdhga7Q6DD96 935 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gsta1Q6P8Q0 223 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Iqcf4Q6P8Y2 204 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mgat5bQ765H6 792 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hfe2Q7TQ32 420 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Prap1Q80XD8 149 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cept1Q8BGS7 416 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Spata2lQ8BNN1 426 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 PisdQ8BSF4 406 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Il17rdQ8JZL1 738 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1033Q8VFK5 310 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Abcb8Q9CXJ4 717 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Med31Q9CXU1 131 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Trim39Q9ESN2 488 aa9.91□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ecm29Q6PDI5 1840 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Auts2A0A087WPF7 1261 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm5796E9Q7M8 205 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3542K7N6U2 270 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3629K7N6Y2 205 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms