RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ppp1r15bQ8BFW3 697 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Fbxl4Q8BH70 621 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Txnl4bQ8BUH1 149 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tmem72Q8C3K5 275 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr818Q8VG46 318 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 ApofQ91V80 315 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sars2Q9JJL8 518 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Atp6ap1Q9R1Q9 463 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 FarsbQ9WUA2 589 aaKnown RBP15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dio2Q9Z1Y9 266 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Irs2P81122 1321 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr1306A2BFL7 312 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr171G5E8J1 314 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm17174M0QWQ9 212 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dnajb5O89114 348 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gpx5P21765 221 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sox4Q06831 440 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ptbp3Q8BHD7 523 aaKnown RBP15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 AntxrlQ8BVM2 641 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 B4gat1Q8BWP8 415 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vps9d1Q8C190 649 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dpep2Q8C255 478 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr1278Q8VF39 313 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Abcg4Q91WA9 646 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Moxd1Q9CXI3 613 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sp2Q9D2H6 612 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ndufv2Q9D6J6 248 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm8127E9Q0P0 100 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 5830473C10RikF8VQ07 620 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Serpinb9cI7HJI5 387 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm8094K7N6U8 211 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Lrrtm3Q8BZ81 582 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Csnk1g3Q8C4X2 424 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tbc1d14Q8CGA2 694 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 NclnQ8VCM8 563 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rpp25Q91WE3 199 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dus3lQ91XI1 637 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 MlycdQ99J39 492 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 4930595M18RikA2RRY9 829 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Klk1b16P04071 261 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cyr61P18406 379 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ccnb2P30276 398 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mkl2P59759 1080 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dusp5Q1HL35 384 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slc37a3Q3TIT8 494 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Smu1Q3UKJ7 513 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Serpina3aQ6P4P1 422 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ldoc1Q7TPY9 151 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 NarsQ8BP47 559 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Irak2Q8CFA1 622 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sh3glb2Q8R3V5 400 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 NepnQ9CQ76 512 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zswim7Q9CWQ2 152 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Hyal6Q9D4E9 494 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dock6Q8VDR9 2080 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm16432A0A0A6YXX9 775 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Igkv12-46A0A140T8P6 115 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ttll2A4Q9E4 540 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nxpe3B9EKK6 559 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm2956E9PVJ0 216 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn2r106E9PY92 862 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tsc22d2E9Q7M2 769 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm5796E9Q7M8 205 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Fmo6J3QMN6 532 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm3629K7N6Y2 205 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm10340K7N708 205 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm8108K7N734 216 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm6401L7N2C0 213 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Acvr2aP27038 513 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ptpn6P29351 595 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 TstP52196 297 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Myadml2Q08AU7 307 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 SgtaQ8BJU0 315 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tgm4Q8BZH1 670 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Aoc1Q8JZQ5 751 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Coq9Q8K1Z0 313 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ddx52Q8K301 598 aaKnown RBP15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Fndc5Q8K4Z2 209 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr811Q8VFI1 319 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gadd45gip1Q9CR59 222 aa15.55■□□□□ 0.08
Trim28-201ENSMUST00000005705 Frem3Q5H8B9 2123 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm37596A0A0A6YXL2 336 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slfn3A0A1L1STQ7 640 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm5152L7N200 190 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mybpc3O70468 1270 aaKnown RBP15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nxf3Q4ZGD9 553 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dcdc2Q5DU00 475 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Klra2Q60660 288 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gramd1cQ8CI52 457 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rnf208Q8K0W3 265 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Fmo2Q8K2I3 535 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 FevQ8QZW2 237 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 As3mtQ91WU5 376 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Q9D112 206 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slc22a17Q9D9E0 401 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Pbld1Q9DCG6 288 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Clec1bQ9JL99 229 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ubqln2Q9QZM0 638 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn1r12G5E8G1 307 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 HbaP01942 142 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms