RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LOC101059948A0A1B0GTJ6 334 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 LRIT2A6NDA9 550 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 E9PBE3 544 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 SAP18O00422 153 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 KLHL41O60662 606 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 PEX11AO75192 247 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 SEMA3DO95025 777 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 CLDN1O95832 211 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 CTSBP07858 339 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 SERPINA6P08185 405 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 PRR35P0CG20 571 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 LBPP18428 481 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 PRPH2P23942 346 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 PTX3P26022 381 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 HNRNPH1P31943 449 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 RAP1GDS1P52306 607 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 STXBP1P61764 594 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 RPL38P63173 70 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 TBL3Q12788 808 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 HYAL2Q12891 473 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 TUBB3Q13509 450 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 PWP1Q13610 501 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 GPR19Q15760 415 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 HKDC1Q2TB90 917 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 LSM12Q3MHD2 195 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 TMEM35AQ53FP2 167 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 ESX1Q8N693 406 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF655Q8N720 491 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 CAMKVQ8NCB2 501 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 CCDC197Q8NCU1 140 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 ZCCHC10Q8TBK6 192 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 TM4SF19Q96DZ7 209 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 APIPQ96GX9 242 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 C5orf34Q96MH7 638 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 RILPQ96NA2 401 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 F2RL3Q96RI0 385 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 MACROD1Q9BQ69 325 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 CENPKQ9BS16 269 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 REXO4Q9GZR2 422 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 LRTM1Q9HBL6 345 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 NMRK1Q9NWW6 199 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 C1orf109Q9NX04 203 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 VPS29Q9UBQ0 182 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 RUVBL1Q9Y265 456 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 ARL2BPQ9Y2Y0 163 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 POLR3HQ9Y535 204 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 MDC1Q14676 2089 aaKnown RBP8.91□□□□□ -0.98
PHGDH-228ENST00000641847 MTORP42345 2549 aa8.91□□□□□ -0.98
PHGDH-228ENST00000641847 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TMEM150CB9EJG8 249 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 C4orf51C9J302 202 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 NPIPB8E9PQR5 432 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 PLPP1O14494 284 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SRPX2O60687 465 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF888P0CJ79 500 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 RNF224P0DH78 156 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 FOLR1P15328 257 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 PGDP52209 483 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ACY1Q03154 408 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ACSM2AQ08AH3 577 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 CUL3Q13618 768 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 AP5B1Q2VPB7 878 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ADPRMQ3LIE5 342 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SPIN4Q56A73 249 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TCTE1Q5JU00 501 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 WASHC2DQ5SRD0 308 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 DEPDC1Q5TB30 811 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TMEM198Q66K66 360 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ACSM2BQ68CK6 577 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TRIM40Q6P9F5 258 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 CHSY3Q70JA7 882 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 LARP4Q71RC2 724 aaKnown RBP eCLIP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 NUDT13Q86X67 352 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 METTL4Q8N3J2 472 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 C1orf52Q8N6N3 182 aaKnown RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TTC29Q8NA56 475 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 FNDC5Q8NAU1 212 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 OR1L3Q8NH93 324 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 CEP70Q8NHQ1 597 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 PMEPA1Q969W9 287 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 GAL3ST3Q96A11 431 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 MARVELD3Q96A59 401 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 MS4A6EQ96DS6 147 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 MARK4Q96L34 752 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF285Q96NJ3 590 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 C17orf62Q9BQA9 187 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 C1orf50Q9BV19 199 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SORBS1Q9BX66 1292 aaKnown RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 EBPLQ9BY08 206 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 MRPL1Q9BYD6 325 aaKnown RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 AICDAQ9GZX7 198 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 KLHL31Q9H511 634 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SLAMF7Q9NQ25 335 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SIDT1Q9NXL6 827 aaKnown RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 KCND3Q9UK17 655 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 G3BP2Q9UN86 482 aaKnown RBP8.9□□□□□ -0.98
PHGDH-228ENST00000641847 TRIM33Q9UPN9 1127 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 SLC5A6Q9Y289 635 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms