RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SERINC2Q96SA4 455 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 KRT12Q99456 494 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 NAPGQ99747 312 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 GRPEL1Q9HAV7 217 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 ADAP2Q9NPF8 381 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 WWOXQ9NZC7 414 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 DAPP1Q9UN19 280 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 SYNDIG1LA6NDD5 238 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 HS6ST1O60243 411 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 CTNSO60931 367 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 CD1DP15813 335 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 POU3F2P20265 443 aaPredicted RBP17.18■□□□□ 0.34
CLN6-220ENST00000637450 SSTR1P30872 391 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 HSPA7P48741 367 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 MTTPP55157 894 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 ATP6V0D1P61421 351 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 DOC2AQ14183 400 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 OR4D1Q15615 310 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 ELAVL1Q15717 326 aaKnown RBP17.18■□□□□ 0.34
CLN6-220ENST00000637450 XKR6Q5GH73 641 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 ADNP2Q6IQ32 1131 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 CYS1Q717R9 158 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 CLNKQ7Z7G1 428 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 BBOF1Q8ND07 529 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 ESAMQ96AP7 390 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 CSF3RQ99062 836 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 SPOCK3Q9BQ16 436 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 TIMMDC1Q9NPL8 285 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 PRDM7Q9NQW5 492 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 RNF14Q9UBS8 474 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 PTBP2Q9UKA9 531 aaKnown RBP17.18■□□□□ 0.34
CLN6-220ENST00000637450 PPT2Q9UMR5 302 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 HRH3Q9Y5N1 445 aa17.18■□□□□ 0.34
CLN6-220ENST00000637450 PHGDHO43175 533 aaKnown RBP17.17■□□□□ 0.34
CLN6-220ENST00000637450 CD22P20273 847 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 CERS1P27544 350 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 GPR85P60893 370 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 RCN2Q14257 317 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 EFTUD2Q15029 972 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLN6-220ENST00000637450 C16orf47Q6ZP98 133 aaPredicted RBP17.17■□□□□ 0.34
CLN6-220ENST00000637450 GPALPP1Q8IXQ4 340 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 SNX31Q8N9S9 440 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 ACBD4Q8NC06 268 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 PTPMT1Q8WUK0 201 aaPredicted RBP17.17■□□□□ 0.34
CLN6-220ENST00000637450 CDKL2Q92772 493 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 UBXN10Q96LJ8 280 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 F2RL3Q96RI0 385 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 GPR22Q99680 433 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 CPNE1Q99829 537 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 EFCAB11Q9BUY7 163 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 LIN28AQ9H9Z2 209 aaKnown RBP17.17■□□□□ 0.34
CLN6-220ENST00000637450 PLSCR2Q9NRY7 297 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 DEPPQ9NTK1 212 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 KCMF1Q9P0J7 381 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 MYOTQ9UBF9 498 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 VTI1BQ9UEU0 232 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 CLCA3PQ9Y6N3 262 aa17.17■□□□□ 0.34
CLN6-220ENST00000637450 POLQO75417 2590 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 A8MVJ9 347 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 CDC40O60508 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN6-220ENST00000637450 OR2J2O76002 312 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 TUBB4AP04350 444 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 IFNA16P05015 189 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 TPOP07202 933 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 STMN1P16949 149 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 SSTR2P30874 369 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 KCNC1P48547 511 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
CLN6-220ENST00000637450 TGM3Q08188 693 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 LAPTM5Q13571 262 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 BMPR2Q13873 1038 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 ZKSCAN8Q15776 578 aaPredicted RBP17.16■□□□□ 0.34
CLN6-220ENST00000637450 TBCCQ15814 346 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 PDK4Q16654 411 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 HIST2H2ACQ16777 129 aaPredicted RBP17.16■□□□□ 0.34
CLN6-220ENST00000637450 HIST2H2AA3Q6FI13 130 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 UBE3DQ7Z6J8 389 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 CD163Q86VB7 1156 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 PDPRQ8NCN5 879 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 MORN4Q8NDC4 146 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 PSD4Q8NDX1 1056 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 OR52N2Q8NGI0 321 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 CA5BP1Q8WTZ4 195 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 DAZLQ92904 295 aaKnown RBP17.16■□□□□ 0.34
CLN6-220ENST00000637450 KIAA1191Q96A73 305 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 SDCCAG3Q96C92 435 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 RBBP8Q99708 897 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 ENKD1Q9H0I2 346 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 COPS7BQ9H9Q2 264 aaPredicted RBP17.16■□□□□ 0.34
CLN6-220ENST00000637450 LYRM4Q9HD34 91 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 SAYSD1Q9NPB0 183 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 HPF1Q9NWY4 346 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 WHRNQ9P202 907 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 TXNDC16Q9P2K2 825 aa17.16■□□□□ 0.34
CLN6-220ENST00000637450 ERVK-11Q9UQG0 969 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms