RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 IL17BQ9UHF5 180 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 KCND3Q9UK17 655 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 NXT1Q9UKK6 140 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 DAPP1Q9UN19 280 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 LSM1O15116 133 aaKnown RBP15.1■□□□□ 0.01
CLN6-216ENST00000636876 KLK10O43240 276 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 TMPRSS11DO60235 418 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 BMP10O95393 424 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 GBAP04062 536 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 ZGLP1P0C6A0 271 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 FAM58BPP0C7Q3 252 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 IL10P22301 178 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 PTPN4P29074 926 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 TPP2P29144 1249 aaPredicted RBP15.1■□□□□ 0.01
CLN6-216ENST00000636876 LIM2P55344 173 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 RAB38P57729 211 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 RAE1P78406 368 aaKnown RBP15.1■□□□□ 0.01
CLN6-216ENST00000636876 VWA2Q5GFL6 755 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 CCNYL2Q5T2Q4 361 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 GALNT18Q6P9A2 607 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 CYP20A1Q6UW02 462 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 PROSER1Q86XN7 944 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 WDR75Q8IWA0 830 aaKnown RBP15.1■□□□□ 0.01
CLN6-216ENST00000636876 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 TBC1D20Q96BZ9 403 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 MIEF2Q96C03 454 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 PPP3R2Q96LZ3 170 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 OR1F2PQ96R84 312 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 SPSB2Q99619 263 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 MAPKAP1Q9BPZ7 522 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 EFHD1Q9BUP0 239 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 NUF2Q9BZD4 464 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 ACTL8Q9H568 366 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 LYARQ9NX58 379 aaKnown RBP15.1■□□□□ 0.01
CLN6-216ENST00000636876 FAM53CQ9NYF3 392 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 MCM8Q9UJA3 840 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 PADI2Q9Y2J8 665 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 RAXQ9Y2V3 346 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 CCDC88CQ9P219 2028 aa15.1■□□□□ 0.01
CLN6-216ENST00000636876 ATP6AP2A0A1C7CYW4 349 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 ARHGAP10A1A4S6 786 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 RRP8O43159 456 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 PCDH7O60245 1069 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 EDF1O60869 148 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 SEC22BO75396 215 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 JRKO75564 520 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 ATP6AP2O75787 350 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 KLF7O75840 302 aaPredicted RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 TIA1P31483 386 aaKnown RBP eCLIP15.09■□□□□ 0.011e-5■■■□□ 19.1
CLN6-216ENST00000636876 MAPK12P53778 367 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 HNRNPH2P55795 449 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 FOXL2P58012 376 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 RPS18P62269 152 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 SRSF6Q13247 344 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 KIAA0040Q15053 153 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 TUBB8Q3ZCM7 444 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 GPR180Q86V85 440 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 SPACA3Q8IXA5 215 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 PRSS58Q8IYP2 241 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 EFCAB3Q8N7B9 438 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 OR2Y1Q8NGV0 311 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 TUBGCP3Q96CW5 907 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 PPP1R36Q96LQ0 422 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 RBCK1Q9BYM8 510 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 SOX17Q9H6I2 414 aaPredicted RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 MEAF6Q9HAF1 191 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 LANCL2Q9NS86 450 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 GIMAP2Q9UG22 337 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 PHF11Q9UIL8 331 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 FBXW2Q9UKT8 454 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 TCFL5Q9UL49 500 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 PTRH2Q9Y3E5 179 aaKnown RBP15.09■□□□□ 0.01
CLN6-216ENST00000636876 ASB4Q9Y574 426 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 SPACA6W5XKT8 324 aa15.09■□□□□ 0.01
CLN6-216ENST00000636876 TRPC5OSA6NMA1 111 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FAM227AF5H4B4 570 aa15.08■□□□□ 0
CLN6-216ENST00000636876 TAF4O00268 1085 aa15.08■□□□□ 0
CLN6-216ENST00000636876 CYR61O00622 381 aa15.08■□□□□ 0
CLN6-216ENST00000636876 SDHDO14521 159 aa15.08■□□□□ 0
CLN6-216ENST00000636876 PEX11AO75192 247 aa15.08■□□□□ 0
CLN6-216ENST00000636876 MYO1DO94832 1006 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FHP07954 510 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FOLR3P41439 243 aa15.08■□□□□ 0
CLN6-216ENST00000636876 KLC1Q07866 573 aa15.08■□□□□ 0
CLN6-216ENST00000636876 ERV3-1Q14264 604 aa15.08■□□□□ 0
CLN6-216ENST00000636876 GALNTL6Q49A17 601 aa15.08■□□□□ 0
CLN6-216ENST00000636876 ATP6AP1LQ52LC2 224 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FAM69BQ5VUD6 431 aa15.08■□□□□ 0
CLN6-216ENST00000636876 NOXRED1Q6NXP6 359 aa15.08■□□□□ 0
CLN6-216ENST00000636876 SHISA6Q6ZSJ9 500 aa15.08■□□□□ 0
CLN6-216ENST00000636876 MED25Q71SY5 747 aa15.08■□□□□ 0
CLN6-216ENST00000636876 TMEM151BQ8IW70 566 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FAM47BQ8NA70 645 aa15.08■□□□□ 0
CLN6-216ENST00000636876 SLC45A3Q96JT2 553 aa15.08■□□□□ 0
CLN6-216ENST00000636876 FCRL1Q96LA6 429 aa15.08■□□□□ 0
CLN6-216ENST00000636876 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
CLN6-216ENST00000636876 CCNL2Q96S94 520 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms