RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 GATSQ8NAP1 163 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 OR10G2Q8NGC3 310 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.17□□□□□ -1.26
PKP4-217ENST00000628904 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 FAM118AQ9NWS6 357 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 DNAJC27Q9NZQ0 273 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CPSF4LA6NMK7 179 aaKnown RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 SOX30O94993 753 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CDH3P22223 829 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CBLP22681 906 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 NTSR1P30989 418 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CSRP3P50461 194 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CDK9P50750 372 aaKnown RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 CTBSQ01459 385 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ILF3Q12906 894 aaKnown RBP eCLIP7.17□□□□□ -1.261e-6■■■■□ 19.5
PKP4-217ENST00000628904 RGNQ15493 299 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 LTB4RQ15722 352 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 NPTX1Q15818 432 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 EXOC3L2Q2M3D2 409 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 NDUFAF5Q5TEU4 345 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ZNF605Q86T29 641 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 KLHDC8BQ8IXV7 354 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SLC5A8Q8N695 610 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 AQP11Q8NBQ7 271 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SMPDL3AQ92484 453 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 C16orf58Q96GQ5 468 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CNPPD1Q9BV87 410 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ZDHHC5Q9C0B5 715 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 OCEL1Q9H607 264 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 DMRT3Q9NQL9 472 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 RAD18Q9NS91 495 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 HRASLS2Q9NWW9 162 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ZNF229Q9UJW7 825 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 GPR52Q9Y2T5 361 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 GFYI3L273 518 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PCDH17O14917 1159 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PGRMC2O15173 223 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 KMOO15229 486 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SLCO2B1O94956 709 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CCNDBP1O95273 360 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 RASAL1O95294 804 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 NTN1O95631 604 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SRPRAP08240 638 aaKnown RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 CISD3P0C7P0 127 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 BMP2P12643 396 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 DSTNP60981 165 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 DUSP7Q16829 419 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 C6orf132Q5T0Z8 1188 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SLC35F1Q5T1Q4 408 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CHRDL2Q6WN34 429 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SHISA6Q6ZSJ9 500 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 FAM92BQ6ZTR7 304 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PTCHD4Q6ZW05 846 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PAGE2Q7Z2X7 111 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 KLHDC8AQ8IYD2 350 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SLC34A3Q8N130 599 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 DTX3Q8N9I9 347 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 STON2Q8WXE9 905 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PLEKHA8Q96JA3 519 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ZNF597Q96LX8 424 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CEP295NLQ96MC4 621 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 FAM192AQ9GZU8 254 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 TCEAL2Q9H3H9 227 aaPredicted RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 TAS2R9Q9NYW1 312 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 RWDD3Q9Y3V2 267 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 PCDHB11Q9Y5F2 797 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SVILO95425 2214 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 CHD5Q8TDI0 1954 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 CCDC88CQ9P219 2028 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 PRRC2CQ9Y520 2896 aaKnown RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 SLC5A10A0PJK1 596 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 ANHXE9PGG2 379 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 PSMD11O00231 422 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 KLK8O60259 260 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 OR10H2O60403 315 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 IFNW1P05000 195 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 LCKP06239 509 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 SMIM18P0DKX4 95 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 UMPSP11172 480 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 PTX3P26022 381 aaPredicted RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 VSX2P58304 361 aaPredicted RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 KIAA0040Q15053 153 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 SPIN4Q56A73 249 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 TMEM196Q5HYL7 178 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 KLHL35Q6PF15 583 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 FIGNL1Q6PIW4 674 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 EIF3MQ7L2H7 374 aaKnown RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 C6orf120Q7Z4R8 191 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 ZNF438Q7Z4V0 828 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 PATL1Q86TB9 770 aaKnown RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 CHERPQ8IWX8 916 aaKnown RBP7.16□□□□□ -1.26
PKP4-217ENST00000628904 SHISA5Q8N114 240 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 LEMD2Q8NC56 503 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 OR8J3Q8NGG0 315 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 APOL4Q9BPW4 351 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 TBC1D29Q9UFV1 150 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 SLC27A6Q9Y2P4 619 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 MAU2Q9Y6X3 613 aa7.16□□□□□ -1.26
PKP4-217ENST00000628904 SPTA1P02549 2419 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms