RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 PRSS38A1L453 326 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 ZNF701M0R085 212 aaPredicted RBP18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 PDPK1O15530 556 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 C9P02748 559 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 PCSK6P29122 969 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 FRKP42685 505 aaPredicted RBP18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 ALDH9A1P49189 494 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 COL19A1Q14993 1142 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 CRB2Q5IJ48 1285 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 BROXQ5VW32 411 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 FAM180BQ6P0A1 224 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 TSEN54Q7Z6J9 526 aaKnown RBP18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 SMRP1Q8NCR6 262 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 FBLIM1Q8WUP2 373 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 TAMM41Q96BW9 452 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 ABCG4Q9H172 646 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 NCKAP1Q9Y2A7 1128 aa18.77■□□□□ 0.6
PCDHB11-202ENST00000624887 LRIT2A6NDA9 550 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 POM121BA6NF01 834 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 TRMUO75648 421 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 CPNE6O95741 557 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 OPN1SWP03999 348 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 MANFP55145 182 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 PCBP4P57723 403 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 KIAA1024LP59773 190 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 TRA2BP62995 288 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 TOP3AQ13472 1001 aaPredicted RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 SKIV2LQ15477 1246 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 OR4C11Q6IEV9 310 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 LAIR2Q6ISS4 152 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 CLVS1Q8IUQ0 354 aaPredicted RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 SPPL2AQ8TCT8 520 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 LZICQ8WZA0 190 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 NEURL3Q96EH8 262 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 NECTIN4Q96NY8 510 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 OR2M4Q96R27 311 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 TUBA1CQ9BQE3 449 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 CXorf21Q9HAI6 301 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 NEUROD4Q9HD90 331 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 MRPS30Q9NP92 439 aaKnown RBP18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 NDUFAF4Q9P032 175 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 BLOC1S6Q9UL45 172 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 PCDHGB3Q9Y5G1 929 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 SNX8Q9Y5X2 465 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 HEBP2Q9Y5Z4 205 aa18.77■□□□□ 0.59
PCDHB11-202ENST00000624887 M0QX08 132 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 PCBP3P57721 371 aaKnown RBP18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 GABARAPL2P60520 117 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 ABATP80404 500 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 KEAP1Q14145 624 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 RAB39AQ14964 217 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 TMEM35AQ53FP2 167 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 IFI44LQ53G44 452 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 SAXO2Q658L1 398 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 FAHD1Q6P587 224 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 FAM124AQ86V42 546 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 ZC3H7AQ8IWR0 971 aaKnown RBP18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 SLC30A8Q8IWU4 369 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 TEFMQ96QE5 360 aaKnown RBP18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 RUBCNLQ9H714 662 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 TMEM184CQ9NVA4 438 aa18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 SCHIP1Q9P0W5 487 aaPredicted RBP18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
PCDHB11-202ENST00000624887 A0A0A6YYD5 115 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 PRAMEF33A0A0G2JMD5 474 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ABCB7O75027 752 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 IFNA14P01570 189 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 JUNBP17275 347 aaPredicted RBP18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 POU3F3P20264 500 aaPredicted RBP18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 DRD1P21728 446 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 GRK3P35626 688 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 BCL6P41182 706 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 DSTNP60981 165 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 RAPSNQ13702 412 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ZIC1Q15915 447 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ERI1Q8IV48 349 aaKnown RBP18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 SETD9Q8NE22 299 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ISOC1Q96CN7 298 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 AICDAQ9GZX7 198 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 RIBC2Q9H4K1 309 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 KIR3DX1Q9H7L2 352 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 SLC6A20Q9NP91 592 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 TEX10Q9NXF1 929 aaPredicted RBP18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 KIF17Q9P2E2 1029 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ANGPT4Q9Y264 503 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 MYO10Q9HD67 2058 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 COL4A2P08572 1712 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 SCAMP1O15126 338 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 KDM1AO60341 852 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 SERPIND1P05546 499 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 GSTM2P28161 218 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 RRM2P31350 389 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 PLA2G16P53816 162 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 CLDN2P57739 230 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 MRPS21P82921 87 aaKnown RBP18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 FAM20CQ8IXL6 584 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 AMER3Q8N944 861 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ATG16L2Q8NAA4 619 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms