RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TRUB1Q8WWH5 349 aaKnown RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 CERS4Q9HA82 394 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 CCNB1IP1Q9NPC3 277 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 PRDM8Q9NQV8 689 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.42□□□□□ -0.58
TP53-227ENST00000622645 OR1A2Q9Y585 309 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 C1QTNF3-AMACRE9PGA6 284 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 M0R129 80 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 LATO43561 262 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PCDH8O95206 1070 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 KRT75O95678 551 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 ARAFP10398 606 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 IDUAP35475 653 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 GGT2P36268 569 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 RXRGP48443 463 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PSMD7P51665 324 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 NUDT6P53370 316 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PCBP3P57721 371 aaKnown RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 RPS26P11Q5JNZ5 115 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 METRNLQ641Q3 311 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 ADAMTSL4Q6UY14 1074 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 IKBIPQ70UQ0 350 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 LRRTM4Q86VH4 590 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PLD3Q8IV08 490 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 UTP15Q8TED0 518 aaKnown RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 SH3YL1Q96HL8 342 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 SIGLEC11Q96RL6 698 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 COPS4Q9BT78 406 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 NLNQ9BYT8 704 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 MBNL1Q9NR56 388 aaKnown RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 ACER3Q9NUN7 267 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 DPP7Q9UHL4 492 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 SLC6A14Q9UN76 642 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 REV3LO60673 3130 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 A0A0G2JN53 185 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 M0R3G1 203 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 ANXA8P13928 327 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 DDCP20711 480 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 DRD3P35462 400 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 BSGP35613 385 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 OPRD1P41143 372 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 CLCNKAP51800 687 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 MANFP55145 182 aaKnown RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 TAS2R38P59533 333 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 DSTNP60981 165 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 RPA4Q13156 261 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 ITGADQ13349 1161 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 ATP1A4Q13733 1029 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 SYT16Q17RD7 645 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 EGFLAMQ63HQ2 1017 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 FBXO46Q6PJ61 603 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 SVOPQ8N4V2 548 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 HORMAD2Q8N7B1 307 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 IPCEF1Q8WWN9 437 aaPredicted RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 UCN3Q969E3 161 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 GTPBP3Q969Y2 492 aaKnown RBP11.41□□□□□ -0.58
TP53-227ENST00000622645 MENTQ9BUN1 341 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 MS4A8Q9BY19 250 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 EPS8L2Q9H6S3 715 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 AHSPQ9NZD4 102 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 WDR37Q9Y2I8 494 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 TSC22D4Q9Y3Q8 395 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 PCDHGA2Q9Y5H1 932 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 SNX11Q9Y5W9 270 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 KIAA1549LQ6ZVL6 1849 aa11.41□□□□□ -0.58
TP53-227ENST00000622645 GOLGA4Q13439 2230 aaKnown RBP11.4□□□□□ -0.58
TP53-227ENST00000622645 NUMA1Q14980 2115 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 OR2A25A4D2G3 310 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 SLC22A1O15245 554 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 PPM1DO15297 605 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 MID1O15344 667 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 RECKO95980 971 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 ITGA2P17301 1181 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 UQCRC2P22695 453 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 SLC19A1P41440 591 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 XCR1P46094 333 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 DGKEP52429 567 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 OCA2Q04671 838 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 HSPB3Q12988 150 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 FAM109BQ6ICB4 259 aaPredicted RBP11.4□□□□□ -0.58
TP53-227ENST00000622645 TANGO2Q6ICL3 276 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 DSG4Q86SJ6 1040 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 IGFN1Q86VF2 1251 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 ARMC8Q8IUR7 673 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 NLGN4XQ8N0W4 816 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 RHOXF1Q8NHV9 184 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 SLC38A5Q8WUX1 472 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 GEMIN6Q8WXD5 167 aaKnown RBP11.4□□□□□ -0.58
TP53-227ENST00000622645 KLK6Q92876 244 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 RAB8BQ92930 207 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 PIP5K1AQ99755 562 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 AIF1LQ9BQI0 150 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 RSPO3Q9BXY4 272 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms