RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 HNRNPFP52597 415 aaKnown RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 RHDQ02161 417 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 KRT80Q6KB66 452 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 FBXO15Q8NCQ5 510 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 CTRCQ99895 268 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 HOPXQ9BPY8 73 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 PAIP1Q9H074 479 aaKnown RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 ADNPQ9H2P0 1102 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CXorf36Q9H7Y0 433 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 PREBQ9HCU5 417 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 KCMF1Q9P0J7 381 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 ANKMY1Q9P2S6 941 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CD300AQ9UGN4 299 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 BAG5Q9UL15 447 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 H0YGG7 62 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CAPN5O15484 640 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 AP1G1O43747 822 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CREG1O75629 220 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CMPK1P30085 196 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 ARF3P61204 181 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 PRKCQQ04759 706 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 MED21Q13503 144 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 EXOSC7Q15024 291 aaKnown RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 FBXO42Q6P3S6 717 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 TRIM40Q6P9F5 258 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 FAM111BQ6SJ93 734 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 SYT13Q7L8C5 426 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 P3H2Q8IVL5 708 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 LRRC56Q8IYG6 542 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 ZNF786Q8N393 782 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 SDR16C5Q8N3Y7 309 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 ZNF655Q8N720 491 aaPredicted RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 SMAD5Q99717 465 aaKnown RBP10.01□□□□□ -0.81
VPS11-208ENST00000621676 SLC7A5P2Q9GIP4 190 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 CCDC90BQ9GZT6 254 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 MKLN1Q9UL63 735 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 ABCG2Q9UNQ0 655 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 KCNE3Q9Y6H6 103 aa10.01□□□□□ -0.81
VPS11-208ENST00000621676 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
VPS11-208ENST00000621676 A0A1W2PR48 441 aa10□□□□□ -0.81
VPS11-208ENST00000621676 RHPN2P1A8MT19 583 aa10□□□□□ -0.81
VPS11-208ENST00000621676 TLR4O00206 839 aa10□□□□□ -0.81
VPS11-208ENST00000621676 SCAMP2O15127 329 aaKnown RBP10□□□□□ -0.81
VPS11-208ENST00000621676 SLC16A5O15375 505 aa10□□□□□ -0.81
VPS11-208ENST00000621676 IFNA16P05015 189 aa10□□□□□ -0.81
VPS11-208ENST00000621676 FASP25445 335 aa10□□□□□ -0.81
VPS11-208ENST00000621676 PTX3P26022 381 aaPredicted RBP10□□□□□ -0.81
VPS11-208ENST00000621676 PRDX6P30041 224 aa10□□□□□ -0.81
VPS11-208ENST00000621676 HPCAL1P37235 193 aa10□□□□□ -0.81
VPS11-208ENST00000621676 WNT3P56703 355 aa10□□□□□ -0.81
VPS11-208ENST00000621676 ZP2Q05996 745 aa10□□□□□ -0.81
VPS11-208ENST00000621676 SYPL1Q16563 259 aa10□□□□□ -0.81
VPS11-208ENST00000621676 GPAT3Q53EU6 434 aa10□□□□□ -0.81
VPS11-208ENST00000621676 ZNF765Q7L2R6 523 aa10□□□□□ -0.81
VPS11-208ENST00000621676 OTULINQ96BN8 352 aa10□□□□□ -0.81
VPS11-208ENST00000621676 SLC29A3Q9BZD2 475 aa10□□□□□ -0.81
VPS11-208ENST00000621676 LRIT1Q9P2V4 623 aa10□□□□□ -0.81
VPS11-208ENST00000621676 DUSP12Q9UNI6 340 aa10□□□□□ -0.81
VPS11-208ENST00000621676 CHD8Q9HCK8 2581 aa10□□□□□ -0.81
VPS11-208ENST00000621676 KIF26BQ2KJY2 2108 aa10□□□□□ -0.81
VPS11-208ENST00000621676 LRIT2A6NDA9 550 aa10□□□□□ -0.81
VPS11-208ENST00000621676 H0YIV9 168 aa10□□□□□ -0.81
VPS11-208ENST00000621676 FAM58BPP0C7Q3 252 aa10□□□□□ -0.81
VPS11-208ENST00000621676 MC3RP41968 323 aa10□□□□□ -0.81
VPS11-208ENST00000621676 FZD5Q13467 585 aa10□□□□□ -0.81
VPS11-208ENST00000621676 ATG9BQ674R7 924 aa10□□□□□ -0.81
VPS11-208ENST00000621676 DEF8Q6ZN54 512 aa10□□□□□ -0.81
VPS11-208ENST00000621676 TTLL10Q6ZVT0 673 aa10□□□□□ -0.81
VPS11-208ENST00000621676 UBE3DQ7Z6J8 389 aa10□□□□□ -0.81
VPS11-208ENST00000621676 ARL14Q8N4G2 192 aa10□□□□□ -0.81
VPS11-208ENST00000621676 GATSQ8NAP1 163 aa10□□□□□ -0.81
VPS11-208ENST00000621676 CHTF18Q8WVB6 975 aa10□□□□□ -0.81
VPS11-208ENST00000621676 SGCDQ92629 289 aa10□□□□□ -0.81
VPS11-208ENST00000621676 WFDC6Q9BQY6 131 aa10□□□□□ -0.81
VPS11-208ENST00000621676 YIPF3Q9GZM5 350 aa10□□□□□ -0.81
VPS11-208ENST00000621676 RERGLQ9H628 205 aa10□□□□□ -0.81
VPS11-208ENST00000621676 REEP4Q9H6H4 257 aa10□□□□□ -0.81
VPS11-208ENST00000621676 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
VPS11-208ENST00000621676 ANXA6P08133 673 aa10□□□□□ -0.81
VPS11-208ENST00000621676 NT5EP21589 574 aa10□□□□□ -0.81
VPS11-208ENST00000621676 CPN2P22792 545 aa10□□□□□ -0.81
VPS11-208ENST00000621676 MAPK1P28482 360 aa10□□□□□ -0.81
VPS11-208ENST00000621676 BUD31P41223 144 aaPredicted RBP10□□□□□ -0.81
VPS11-208ENST00000621676 CCT8P50990 548 aa10□□□□□ -0.81
VPS11-208ENST00000621676 ABHD18Q0P651 414 aa10□□□□□ -0.81
VPS11-208ENST00000621676 OR4C11Q6IEV9 310 aa10□□□□□ -0.81
VPS11-208ENST00000621676 POMZP3Q6PJE2 187 aa10□□□□□ -0.81
VPS11-208ENST00000621676 OOSP2Q86WS3 158 aa10□□□□□ -0.81
VPS11-208ENST00000621676 OR5M3Q8NGP4 307 aa10□□□□□ -0.81
VPS11-208ENST00000621676 PUM2Q8TB72 1066 aaKnown RBP eCLIP10□□□□□ -0.81
VPS11-208ENST00000621676 RERGQ96A58 199 aaPredicted RBP10□□□□□ -0.81
VPS11-208ENST00000621676 TM4SF18Q96CE8 201 aa10□□□□□ -0.81
VPS11-208ENST00000621676 SLC47A1Q96FL8 570 aa10□□□□□ -0.81
VPS11-208ENST00000621676 HAUS8Q9BT25 410 aa10□□□□□ -0.81
VPS11-208ENST00000621676 EFHD1Q9BUP0 239 aa10□□□□□ -0.81
VPS11-208ENST00000621676 CNPPD1Q9BV87 410 aa10□□□□□ -0.81
VPS11-208ENST00000621676 NAALAD2Q9Y3Q0 740 aa10□□□□□ -0.81
VPS11-208ENST00000621676 COL12A1Q99715 3063 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms