RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 STX3Q13277 289 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ATP1A4Q13733 1029 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 SH2D4BQ5SQS7 431 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 CES4AQ5XG92 561 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 KANK2Q63ZY3 851 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 FAAH2Q6GMR7 532 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 CYP20A1Q6UW02 462 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 PAGE2Q7Z2X7 111 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 HOMEZQ8IX15 550 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 CLYBLQ8N0X4 340 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 METTL4Q8N3J2 472 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ZCCHC7Q8N3Z6 543 aaKnown RBP17.51■□□□□ 0.39
CIRBP-245ENST00000621399 AGR3Q8TD06 166 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ADAMTS18Q8TE60 1221 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 METTL21AQ8WXB1 218 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 MAPKAP1Q9BPZ7 522 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ZNF717Q9BY31 904 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ACPTQ9BZG2 426 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 DDX31Q9H8H2 851 aaKnown RBP17.51■□□□□ 0.39
CIRBP-245ENST00000621399 LANCL2Q9NS86 450 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 KCMF1Q9P0J7 381 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 FBXW2Q9UKT8 454 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 PTPRQQ9UMZ3 2332 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 HS3ST3B1Q9Y662 390 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 SPACA6W5XKT8 324 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 SCN3AQ9NY46 2000 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 BAHCC1Q9P281 2608 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 ARHGAP10A1A4S6 786 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 SERTM1A2A2V5 107 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 TMEM233B4DJY2 109 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 ITM2AO43736 263 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 ALOX12BO75342 701 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 LYPLA1O75608 230 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-245ENST00000621399 GBAP04062 536 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 KLK1P06870 262 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 C8orf89P0DMQ9 161 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 SLC1A6P48664 564 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 TBL3Q12788 808 aaKnown RBP17.5■□□□□ 0.39
CIRBP-245ENST00000621399 IMPG1Q17R60 797 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 ATG14Q6ZNE5 492 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 FAM47BQ8NA70 645 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 VPS50Q96JG6 964 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 ZNF395Q9H8N7 513 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-245ENST00000621399 P4HTMQ9NXG6 502 aa17.5■□□□□ 0.39
CIRBP-245ENST00000621399 MRPS33Q9Y291 106 aaKnown RBP17.5■□□□□ 0.39
CIRBP-245ENST00000621399 A0A0A6YYD5 115 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 ARGFXA6NJG6 315 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CYR61O00622 381 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CLDN4O14493 209 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 SOCS6O14544 535 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 PCDH17O14917 1159 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 PRMT3O60678 531 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 SNUPNO95149 360 aaKnown RBP17.49■□□□□ 0.39
CIRBP-245ENST00000621399 ITGB2P05107 769 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CYC1P08574 325 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 ACPPP15309 386 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CPN2P22792 545 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 EFNA3P52797 238 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 RHAGQ02094 409 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 BTKQ06187 659 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 NSDHLQ15738 373 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 TBR1Q16650 682 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 SPDYAQ5MJ70 313 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CCNYL2Q5T2Q4 361 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 BORAQ6PGQ7 559 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 KIRREL2Q6UWL6 708 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 COMMD6Q7Z4G1 85 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 TRIM46Q7Z4K8 759 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 GPR180Q86V85 440 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 TRIM42Q8IWZ5 723 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 C1orf52Q8N6N3 182 aaKnown RBP17.49■□□□□ 0.39
CIRBP-245ENST00000621399 EFCAB3Q8N7B9 438 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 APOBEC4Q8WW27 367 aaKnown RBP17.49■□□□□ 0.39
CIRBP-245ENST00000621399 C8orf44Q96CB5 159 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 PTCHD1Q96NR3 888 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 CSF3RQ99062 836 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 MESP1Q9BRJ9 268 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 LYARQ9NX58 379 aaKnown RBP17.49■□□□□ 0.39
CIRBP-245ENST00000621399 MS4A12Q9NXJ0 267 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 ZDHHC2Q9UIJ5 367 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 PHF11Q9UIL8 331 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 ADAM29Q9UKF5 820 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 DNAJC15Q9Y5T4 150 aa17.49■□□□□ 0.39
CIRBP-245ENST00000621399 SLC28A1O00337 649 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 TMPRSS11DO60235 418 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 FAM58BPP0C7Q3 252 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 BTG2P78543 158 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 BST1Q10588 318 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 TMEM205Q6UW68 189 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 MED25Q71SY5 747 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 DDIASQ8IXT1 998 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 ZNF595Q8IYB9 648 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 PLPP5Q8NEB5 264 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 CHTF18Q8WVB6 975 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 EXTL1Q92935 676 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 FER1L6-AS2Q96M78 137 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 ILKAPQ9H0C8 392 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-245ENST00000621399 PRDM9Q9NQV7 894 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms