RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZNF846Q147U1 533 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM69BQ5VUD6 431 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZDHHC21Q8IVQ6 265 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 KLHL36Q8N4N3 616 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 COL21A1Q96P44 957 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SCGB3A2Q96PL1 93 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF304Q9HCX3 659 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 GHRLQ9UBU3 117 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 RNF11Q9Y3C5 154 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC30A4O14863 429 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 IFNA6P05013 189 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 LPLP06858 475 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TCF4P15884 667 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TCN2P20062 427 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CDKL1Q00532 357 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FASTKD3Q14CZ7 662 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM225Q6GV28 225 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLITRK4Q8IW52 837 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPR137CQ8N3F9 429 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 C9orf43Q8TAL5 461 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF184Q99676 751 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CMTM6Q9NX76 183 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SDC2P34741 201 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 CBFBQ13951 182 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RSBN1Q5VWQ0 802 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MISPQ8IVT2 679 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RNF148Q8N7C7 305 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 SFXN5Q8TD22 340 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 S100ZQ8WXG8 99 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ACTRT3Q9BYD9 372 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 WDR55Q9H6Y2 383 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRNAU1APQ9NX07 287 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 PISDQ9UG56 409 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 DLGAP4Q9Y2H0 992 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 KCTD3Q9Y597 815 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC6A4P31645 630 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 BCAP31P51572 246 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 POU4F2Q12837 409 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRIK2Q13002 908 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 PTPRCAPQ14761 206 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB39AQ14964 217 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRIM16LQ309B1 348 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 GARNL3Q5VVW2 1013 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 SUSD1Q6UWL2 747 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR10A6Q8NH74 314 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR14L1PQ8NHC6 308 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MRPS2Q9Y399 296 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 A0A096LPI6 279 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 NSG1A0A0A6YYJ2 146 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RPLP0P05388 317 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ACPPP15309 386 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 FOXN2P32314 431 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 AHRP35869 848 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 PITPNAQ00169 270 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 DCTN2Q13561 401 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ADNP2Q6IQ32 1131 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MCATQ8IVS2 390 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 PKP4Q99569 1192 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR51B5Q9H339 312 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 THSD1Q9NS62 852 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MRPL39Q9NYK5 338 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 TFECO14948 347 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 PSIP1O75475 530 aaKnown RBP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 GSTT2BP0CG30 244 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 THRBP10828 461 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ABOP16442 354 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 GABRA3P34903 492 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 TARDBPQ13148 414 aaKnown RBP eCLIP9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RIPK1Q13546 671 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 EXT1Q16394 746 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC39A13Q96H72 371 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 YIPF3Q9GZM5 350 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 POLE3Q9NRF9 147 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MGAT4BQ9UQ53 548 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 CDC14CA4D256 554 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 RNF13O43567 381 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZFAND5O76080 213 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 CSTAP01040 98 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLUP10909 449 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBL4AP11441 157 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 AQP1P29972 269 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 IL12RB1P42701 662 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLCN2P51788 898 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC18A2Q05940 514 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 C1orf220Q5T0J3 134 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 UFD1Q92890 307 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 ULBP3Q9BZM4 244 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 KCNK12Q9HB15 430 aa9.34□□□□□ -0.91
TNFRSF9-204ENST00000615230 A0A0G2JN53 185 aa9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 A0A0G2JPF8 293 aa9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 HNRNPCL3B7ZW38 293 aa9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 HNRNPCL4P0DMR1 293 aa9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
TNFRSF9-204ENST00000615230 MOGSQ13724 837 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms