RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KDELR3O43731 214 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 RORCP51449 518 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 VLDLRP98155 873 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 RIPPLY1Q0D2K3 151 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ABRQ12979 859 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 REPS1Q96D71 796 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ALG14Q96F25 216 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 LINGO1Q96FE5 620 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 TAPBPLQ9BX59 468 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 AASDHPPTQ9NRN7 309 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ZNF490Q9ULM2 529 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ITM2BQ9Y287 266 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 PCDHGB3Q9Y5G1 929 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 OR51B4Q9Y5P0 310 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 MYCLP1P12525 358 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ZNF30P17039 623 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 GABRB1P18505 474 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 CTSOP43234 321 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ST3GAL4Q11206 333 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 QPRTQ15274 297 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 GLRX5Q86SX6 157 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 DCBLD1Q8N8Z6 715 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 BTN2A2Q8WVV5 523 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ESAMQ96AP7 390 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 MGLLQ99685 303 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 LRTM1Q9HBL6 345 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 ZDHHC4Q9NPG8 344 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 CA14Q9ULX7 337 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 SNX8Q9Y5X2 465 aa21.01■□□□□ 0.95
POLR2J3-220ENST00000613744 TFECO14948 347 aaPredicted RBP21■□□□□ 0.95
POLR2J3-220ENST00000613744 TPPPO94811 219 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ESR1P03372 595 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CTRB1P17538 263 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 PTPN6P29350 595 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CTHP32929 405 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 S100A3P33764 101 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 KDELR2P33947 212 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CLDN8P56748 225 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CD83Q01151 205 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 IKZF1Q13422 519 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 USP39Q53GS9 565 aaKnown RBP21■□□□□ 0.95
POLR2J3-220ENST00000613744 CTRB2Q6GPI1 263 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ZNF783Q6ZMS7 281 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 TRIM69Q86WT6 500 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 C10orf111Q8N326 155 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 MYOCQ99972 504 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CIPCQ9C0C6 399 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 MMP28Q9H239 520 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 PDFQ9HBH1 243 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 SLC6A13Q9NSD5 602 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 DUSP12Q9UNI6 340 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CMAHPQ9Y471 501 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 SH3D21A4FU49 640 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 A8MVJ9 347 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 LEUTXA8MZ59 168 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 PRRT4C9JH25 899 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 VIPP01282 170 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CHMP24386 653 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ZNF140P52738 457 aaPredicted RBP21■□□□□ 0.95
POLR2J3-220ENST00000613744 ARF5P84085 180 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 RUNX1T1Q06455 604 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ZNF235Q14590 738 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 PTPRNQ16849 979 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 VMACQ2NL98 169 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ADIPOR2Q86V24 386 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 GJD3Q8N144 294 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 C1orf52Q8N6N3 182 aaKnown RBP21■□□□□ 0.95
POLR2J3-220ENST00000613744 GPR151Q8TDV0 419 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 CYB5D2Q8WUJ1 264 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 KCNJ9Q92806 393 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 ASPNQ9BXN1 380 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 GPR83Q9NYM4 423 aa21■□□□□ 0.95
POLR2J3-220ENST00000613744 TBC1D3BA6NDS4 549 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 RAB25P57735 213 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 TSTQ16762 297 aaKnown RBP20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 GLYR1Q49A26 553 aaPredicted RBP20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 YIPF7Q8N8F6 280 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 OR10Q1Q8NGQ4 319 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 CD200R1Q8TD46 325 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 EEF1AKMT1Q8WVE0 214 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 ZC3HAV1LQ96H79 300 aaKnown RBP20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 HSH2DQ96JZ2 352 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 AIFM2Q9BRQ8 373 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 IPPKQ9H8X2 491 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 PRDM8Q9NQV8 689 aa20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 EIF3KQ9UBQ5 218 aaKnown RBP20.99■□□□□ 0.95
POLR2J3-220ENST00000613744 RGS5O15539 181 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 PROM1O43490 865 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 OR2B3O76000 313 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 STK19P49842 368 aaPredicted RBP20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 PTPRCAPQ14761 206 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 HDDC2Q7Z4H3 204 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 KRTCAP2Q8N6L1 136 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 TESCQ96BS2 214 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 EXOC2Q96KP1 924 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 P2RY13Q9BPV8 354 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 POLR1EQ9GZS1 481 aaKnown RBP20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 SLC2A4RGQ9NR83 387 aa20.98■□□□□ 0.95
POLR2J3-220ENST00000613744 ING3Q9NXR8 418 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms