RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SLC30A6Q6NXT4 461 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MOB1BQ7L9L4 216 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PLPP5Q8NEB5 264 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 C12orf57Q99622 126 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 WASF3Q9UPY6 502 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MEGF11A6BM72 1044 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CKMT1AP12532 417 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 NFYAP23511 347 aaPredicted RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 EDNRAP25101 427 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ARL3P36405 182 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SLC1A3P43003 542 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SSX7Q7RTT5 188 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 LGI2Q8N0V4 545 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 OR2T33Q8NG76 320 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 RHEBL1Q8TAI7 183 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ARFGEF2Q9Y6D5 1785 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 WASHC1A8K0Z3 465 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 B3GAT3O94766 335 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 C1QBP02746 253 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 JUPP14923 745 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CD1EP15812 388 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 ZP3P21754 424 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SLC6A6P31641 620 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 BRCC3P46736 316 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 DBPQ10586 325 aaPredicted RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 KCNC3Q14003 757 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CHRFAM7AQ494W8 412 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PLAG1Q6DJT9 500 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 BRSK1Q8TDC3 778 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 AZIN2Q96A70 460 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 TECPR2O15040 1411 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MATN4O95460 622 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 RNH1P13489 461 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 SNAPC2Q13487 334 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 RAB11BQ15907 218 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SLC36A3Q495N2 470 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CLDN22Q8N7P3 220 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 OR13F1Q8NGS4 319 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 GNPDA2Q8TDQ7 276 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 EFCAB11Q9BUY7 163 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SVILO95425 2214 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PRAMEF22A3QJZ6 481 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MC4RP32245 332 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SPAM1P38567 509 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 RPS3AP61247 264 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 STXBP1P61764 594 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 NFKB2Q00653 900 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 DUSP4Q13115 394 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CAPSQ13938 189 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 DHCR24Q15392 516 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 FAM124AQ86V42 546 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CCDC71LQ8N9Z2 235 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PXT1Q8NFP0 134 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 VPS25Q9BRG1 176 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SAMD10Q9BYL1 202 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 GPRC5CQ9NQ84 441 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 AGO1Q9UL18 857 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 PBLDP30039 288 aaPredicted RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 SLC5A2P31639 672 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MAN2A2P49641 1150 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CFAP77Q6ZQR2 320 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 OR8D1Q8WZ84 308 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SLC6A17Q9H1V8 727 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 KCNH6Q9H252 994 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 NLKQ9UBE8 527 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 HEBP2Q9Y5Z4 205 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 LCHNA4D1U4 455 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ICAM3P32942 547 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 UBXN2BQ14CS0 331 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CEP68Q76N32 757 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SCARB1Q8WTV0 552 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MTFMTQ96DP5 389 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 CNN2Q99439 309 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 BARD1Q99728 777 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 FTHL17Q9BXU8 183 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 WIF1Q9Y5W5 379 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 TRBC2A0A5B9 178 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 A8MVJ9 347 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 CASC3O15234 703 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 HCCSP53701 268 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 H3F3AP84243 136 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 MAPK14Q16539 360 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ZNF550Q7Z398 422 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 FAM151AQ8WW52 585 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PIH1D1Q9NWS0 290 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 DNMT3LQ9UJW3 386 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 HEATR1Q9H583 2144 aaKnown RBP8.47□□□□□ -1.05
TTC28-208ENST00000612946 FAM155BO75949 473 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ADRB2P07550 413 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 RAB1AP62820 205 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ASAH1Q13510 395 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 TSTD2Q5T7W7 516 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms