RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 KLHL20Q9Y2M5 609 aa13.44□□□□□ -0.26
PCDHGA3-202ENST00000612467 MYO10Q9HD67 2058 aa13.44□□□□□ -0.26
PCDHGA3-202ENST00000612467 CLPXO76031 633 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ADRA2AP08913 450 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 HNRNPFP52597 415 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 CDK3Q00526 305 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 EEF1A2Q05639 463 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PCDH1Q08174 1060 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 LRRC74AQ0VAA2 488 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 LEXMQ3ZCV2 418 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PDZD3Q86UT5 571 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 C7orf61Q8IZ16 206 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 LINC01555Q8NAE3 123 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 STARD8Q92502 1023 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 MYNNQ9NPC7 610 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 LHX9Q9NQ69 397 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ITM2CQ9NQX7 267 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PRKAG2Q9UGJ0 569 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 MOSPD1Q9UJG1 213 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PMF1-BGLAPU3KQ54 211 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ANKDD1BA6NHY2 528 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 RGS10O43665 173 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 TMPRSS11DO60235 418 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 BCHEP06276 602 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 SEC13P55735 322 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ITGADQ13349 1161 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 IL18R1Q13478 541 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 NR1D2Q14995 579 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 IFI44LQ53G44 452 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 SLCO6A1Q86UG4 719 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 FBXO15Q8NCQ5 510 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF566Q969W8 418 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 RAD51AP1Q96B01 352 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 CNDP2Q96KP4 475 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 GPR83Q9NYM4 423 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PADI2Q9Y2J8 665 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 TPRKBQ9Y3C4 175 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 SCN3AQ9NY46 2000 aa13.43□□□□□ -0.26
PCDHGA3-202ENST00000612467 A0A1W2PS29 197 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 TRBC2A0A5B9 178 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR52A4PA6NMU1 304 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 NFATC1O95644 943 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 FGL2Q14314 439 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 MOGQ16653 247 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 CEACAM20Q6UY09 585 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 TSPYL5Q86VY4 417 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 ANKRD13BQ86YJ7 626 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 HCAR2Q8TDS4 363 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 SMARCD2Q92925 531 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 EPYCQ99645 322 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 RPP25Q9BUL9 199 aaKnown RBP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 A0A1W2PP55 124 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 PI15O43692 258 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 SEMA7AO75326 666 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 JUNDP17535 347 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 LIPAP38571 399 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 MAPK12P53778 367 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 DPTQ07507 201 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 DOC2BQ14184 412 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 PUM1Q14671 1186 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF750Q32MQ0 723 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 IGFN1Q86VF2 1251 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 C17orf64Q86WR6 236 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR4C15Q8NGM1 316 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 GOT1L1Q8NHS2 421 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 TM4SF18Q96CE8 201 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 IMP3Q9NV31 184 aaKnown RBP13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
PCDHGA3-202ENST00000612467 A0A1W2PPV9 198 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR1F1O43749 312 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 POU1F1P28069 291 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MAT2AP31153 395 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 GJA4P35212 333 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 FEN1P39748 380 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 LIM2P55344 173 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 GPM6BQ13491 265 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TEAD4Q15561 434 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 VITQ6UXI7 678 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 DGLUCYQ7Z3D6 616 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR5D16Q8NGK9 328 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 YIPF6Q96EC8 236 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PPP1R16AQ96I34 528 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 COX14Q96I36 57 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms