RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RCN2Q14257 317 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 ELAVL1Q15717 326 aaKnown RBP16.54■□□□□ 0.24
SSBP1-215ENST00000612337 CMPK2Q5EBM0 449 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 GPSM1Q86YR5 675 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 GPALPP1Q8IXQ4 340 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 TMEM132CQ8N3T6 1108 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 SPATA6LQ8N4H0 392 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 WDR34Q96EX3 536 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 TSPAN17Q96FV3 270 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-215ENST00000612337 CAB39LQ9H9S4 337 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 PLSCR2Q9NRY7 297 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 DAPP1Q9UN19 280 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 MTO1Q9Y2Z2 717 aaKnown RBP16.54■□□□□ 0.24
SSBP1-215ENST00000612337 SNX24Q9Y343 169 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 TMEM200CA6NKL6 621 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 PRAMEF4O60810 478 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CTNSO60931 367 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 STK16O75716 305 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 TUBB4AP04350 444 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 TPOP07202 933 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CCDC166P0CW27 439 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CD1DP15813 335 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 GPR85P60893 370 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ATP6V0D1P61421 351 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 TGM3Q08188 693 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 XKR6Q5GH73 641 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 PRAMEF9Q5VWM5 478 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 SULT1C3Q6IMI6 304 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ADNP2Q6IQ32 1131 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CAPN12Q6ZSI9 719 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CLNKQ7Z7G1 428 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CD163Q86VB7 1156 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ACBD4Q8NC06 268 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 BBOF1Q8ND07 529 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CA5BP1Q8WTZ4 195 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 PYROXD1Q8WU10 500 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CDKL2Q92772 493 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 DAZLQ92904 295 aaKnown RBP16.53■□□□□ 0.24
SSBP1-215ENST00000612337 SDCCAG3Q96C92 435 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 PTCD3Q96EY7 689 aaKnown RBP16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CSF3RQ99062 836 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ENKD1Q9H0I2 346 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 COPS7BQ9H9Q2 264 aaPredicted RBP16.53■□□□□ 0.24
SSBP1-215ENST00000612337 COQ3Q9NZJ6 369 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 KCMF1Q9P0J7 381 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF490Q9ULM2 529 aaPredicted RBP16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ERVK-11Q9UQG0 969 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 CLCA3PQ9Y6N3 262 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF407Q9C0G0 2248 aa16.53■□□□□ 0.24
SSBP1-215ENST00000612337 ANKRD17O75179 2603 aaKnown RBP16.52■□□□□ 0.24
SSBP1-215ENST00000612337 HIVEP1P15822 2718 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 A8MVJ9 347 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 CXorf49A8MYA2 514 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PHGDHO43175 533 aaKnown RBP16.52■□□□□ 0.24
SSBP1-215ENST00000612337 CDC40O60508 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSBP1-215ENST00000612337 OR2J2O76002 312 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PAFAH1B1P43034 410 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 HSPA7P48741 367 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 LAPTM5Q13571 262 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 BMPR2Q13873 1038 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 DOC2AQ14183 400 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 EFTUD2Q15029 972 aaKnown RBP eCLIP16.52■□□□□ 0.244e-17■□□□□ 11.1
SSBP1-215ENST00000612337 OR4D1Q15615 310 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PDK4Q16654 411 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 FBXO48Q5FWF7 155 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 ARHGAP11AQ6P4F7 1023 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 C16orf47Q6ZP98 133 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-215ENST00000612337 SNX31Q8N9S9 440 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PDPRQ8NCN5 879 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PSD4Q8NDX1 1056 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 OR52N2Q8NGI0 321 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 ESAMQ96AP7 390 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 C14orf79Q96F83 325 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 KRT12Q99456 494 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 GPR22Q99680 433 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 CPNE1Q99829 537 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 PRDM7Q9NQW5 492 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 DEPPQ9NTK1 212 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 HPF1Q9NWY4 346 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 TXNDC16Q9P2K2 825 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 MYOTQ9UBF9 498 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 RNF14Q9UBS8 474 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 VTI1BQ9UEU0 232 aa16.52■□□□□ 0.24
SSBP1-215ENST00000612337 DNAJC13O75165 2243 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 IFNA16P05015 189 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 STMN1P16949 149 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 CD22P20273 847 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 SSTR1P30872 391 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 KCNC1P48547 511 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 PAGE2BQ5JRK9 111 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 TMEM211Q6ICI0 200 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 CYS1Q717R9 158 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 MARVELD2Q8N4S9 558 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 MORN4Q8NDC4 146 aa16.51■□□□□ 0.23
SSBP1-215ENST00000612337 SRFBP1Q8NEF9 429 aaKnown RBP16.51■□□□□ 0.23
SSBP1-215ENST00000612337 OR14A16Q8NHC5 309 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms