RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZFP41Q8N8Y5 198 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 SCAIQ8N9R8 606 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 C7orf57Q8NEG2 295 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 TRNT1Q96Q11 434 aaKnown RBP13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ZNF282Q9UDV7 671 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-207ENST00000612273 STOML2Q9UJZ1 356 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 TRAV19A0A0A6YYK7 116 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 FEZF1A0PJY2 475 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ATG13O75143 517 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 SNX4O95219 450 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ASMTP46597 345 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 CAV3P56539 151 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
COL6A1-207ENST00000612273 NTHL1P78549 312 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 TEAD4Q15561 434 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 TPGS2Q68CL5 300 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 OR9Q1Q8NGQ5 310 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 GPR151Q8TDV0 419 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ITPKCQ96DU7 683 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ASPNQ9BXN1 380 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 MMP28Q9H239 520 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 CARD8Q9Y2G2 431 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 TMEM98Q9Y2Y6 226 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 YARS2Q9Y2Z4 477 aaKnown RBP13.43□□□□□ -0.26
COL6A1-207ENST00000612273 HCN4Q9Y3Q4 1203 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 PPM1DO15297 605 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 IFNW1P05000 195 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GSTM1P09488 218 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TNFSF8P32971 234 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 UBE3AQ05086 875 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 FADDQ13158 208 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 PIN1Q13526 163 aaPredicted RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 NFE2L1Q14494 772 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GRHL2Q6ISB3 625 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TRIM40Q6P9F5 258 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 SLCO4C1Q6ZQN7 724 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 LAX1Q8IWV1 398 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CHCHD4Q8N4Q1 142 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 C16orf78Q8WTQ4 265 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CHTF18Q8WVB6 975 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 XAGE5Q8WWM1 108 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TRMT2BQ96GJ1 504 aaKnown RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 PSD2Q9BQI7 771 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 EMILIN2Q9BXX0 1053 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 RETREG1Q9H6L5 497 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TRPC4Q9UBN4 977 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 ASF1AQ9Y294 204 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 DYRK1BQ9Y463 629 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 IGLV3-16A0A075B6K0 115 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CLEC2LP0C7M8 214 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 NPPBP16860 134 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 RPS19P39019 145 aaKnown RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 SLC15A1P46059 708 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 LIM2P55344 173 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TUBA1BP68363 451 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GALNT13Q8IUC8 556 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 OTULINQ96BN8 352 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 ECHDC3Q96DC8 303 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TRMT61AQ96FX7 289 aaKnown RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 F2RL3Q96RI0 385 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 MCCC1Q96RQ3 725 aaPredicted RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GABARAPL3Q9BY60 117 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 KCNK12Q9HB15 430 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 NEK6Q9HC98 313 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 PIPSLA2A3N6 862 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GRM6O15303 877 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 NTN1O95631 604 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CTSLP07711 333 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 MPC1LP0DKB6 136 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CASP3P42574 277 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 MANFP55145 182 aaKnown RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 OR2B6P58173 313 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TARDBPQ13148 414 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 SEC23BQ15437 767 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 FRMPD2BQ6IN97 320 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 DEPDC4Q8N2C3 294 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 OR5D16Q8NGK9 328 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 GLYATL1Q969I3 302 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 LYSMD1Q96S90 227 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 POLR2J2Q9GZM3 115 aaKnown RBP13.42□□□□□ -0.26
COL6A1-207ENST00000612273 CXorf36Q9H7Y0 433 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TAS2R9Q9NYW1 312 aa13.42□□□□□ -0.26
COL6A1-207ENST00000612273 TLX2O43763 284 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-207ENST00000612273 TNFRSF21O75509 655 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 ACRP10323 421 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 PSMB5P28074 263 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 RACK1P63244 317 aaKnown RBP13.41□□□□□ -0.26
COL6A1-207ENST00000612273 PUM1Q14671 1186 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL6A1-207ENST00000612273 SSX1Q16384 188 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 RAET1GQ6H3X3 334 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms