RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SMAD6O43541 496 aaKnown RBP21.39■■□□□ 1.01
SHANK2-220ENST00000608988 GASTP01350 101 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 C1SP09871 688 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 SLC11A1P49279 550 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF763Q0D2J5 394 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 TAF1CQ15572 869 aaPredicted RBP21.39■■□□□ 1.01
SHANK2-220ENST00000608988 SLC8B1Q6J4K2 584 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 RGMBQ6NW40 437 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 FAM131AQ6UXB0 335 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 ANGPTL8Q6UXH0 198 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 UNC5DQ6UXZ4 953 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 PLCZ1Q86YW0 608 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 SLC34A3Q8N130 599 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 ASZ1Q8WWH4 475 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 JPH3Q8WXH2 748 aaPredicted RBP21.39■■□□□ 1.01
SHANK2-220ENST00000608988 MED30Q96HR3 178 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 TTYH2Q9BSA4 534 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 TMEM175Q9BSA9 504 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 NIPAL2Q9H841 368 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 RPRD1BQ9NQG5 326 aaKnown RBP21.39■■□□□ 1.01
SHANK2-220ENST00000608988 GULP1Q9UBP9 304 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 PRAMEF33A0A0G2JMD5 474 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 GNG14A0A1W2PPG7 69 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 TRBC2A0A5B9 178 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 PRAMEF10O60809 474 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 CYP7B1O75881 506 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 SLCO2B1O94956 709 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 CST5P28325 142 aaPredicted RBP21.38■■□□□ 1.01
SHANK2-220ENST00000608988 HBA1P69905 142 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 GALK2Q01415 458 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 SLAMF1Q13291 335 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 PDZK1Q5T2W1 519 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 PPP2R2DQ66LE6 453 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 CCDC149Q6ZUS6 474 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 FAM217AQ8IXS0 508 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.38■■□□□ 1.01
SHANK2-220ENST00000608988 ZFAND1Q8TCF1 268 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 AP3S1Q92572 193 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 ECHDC3Q96DC8 303 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 ZC3HAV1LQ96H79 300 aaKnown RBP21.38■■□□□ 1.01
SHANK2-220ENST00000608988 SAMD11Q96NU1 681 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 TMCC3Q9ULS5 477 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 SLC6A14Q9UN76 642 aa21.38■■□□□ 1.01
SHANK2-220ENST00000608988 PROM1O43490 865 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 HCN1O60741 890 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 PSIP1O75475 530 aaKnown RBP21.37■■□□□ 1.01
SHANK2-220ENST00000608988 CYP17A1P05093 508 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 CKBP12277 381 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 CPN2P22792 545 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 QPRTQ15274 297 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 ZMAT1Q5H9K5 638 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 DGKKQ5KSL6 1271 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 C2orf69Q8N8R5 385 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 OR2AP1Q8NGE2 309 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 OR8J1Q8NGP2 316 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 CREB3L4Q8TEY5 395 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 BRD9Q9H8M2 597 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 RC3H2Q9HBD1 1191 aaKnown RBP21.37■■□□□ 1.01
SHANK2-220ENST00000608988 REV1Q9UBZ9 1251 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 EXO1Q9UQ84 846 aaKnown RBP21.37■■□□□ 1.01
SHANK2-220ENST00000608988 H3BM21 787 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 J3KTA2 159 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 QSOX1O00391 747 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 ARHGEF9O43307 516 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 POU2F1P14859 743 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 DDX5P17844 614 aaKnown RBP21.37■■□□□ 1.01
SHANK2-220ENST00000608988 PTBP1P26599 531 aaKnown RBP eCLIP21.37■■□□□ 1.013e-7■■■■■ 27.3
SHANK2-220ENST00000608988 SOX3P41225 446 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 PTSQ03393 145 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF385BQ569K4 471 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 SLC25A30Q5SVS4 291 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 DDI2Q5TDH0 399 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 MFSD4BQ5TF39 518 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 APCDD1Q8J025 514 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 OR7G3Q8NG95 312 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 POLR2J2Q9GZM3 115 aaKnown RBP21.37■■□□□ 1.01
SHANK2-220ENST00000608988 ISYNA1Q9NPH2 558 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 TIGARQ9NQ88 270 aa21.37■■□□□ 1.01
SHANK2-220ENST00000608988 A0A1W2PQ67 120 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 FABP12A6NFH5 140 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 FOXE1O00358 373 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 FAAHO00519 579 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 MYL12BO14950 172 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 ETHE1O95571 254 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 C6orf47O95873 294 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 HLA-DQB1P01920 261 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 CSF3P09919 207 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF8P17098 575 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 SLC9A3P48764 834 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 CCSAPQ6IQ19 270 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 TRAF7Q6Q0C0 670 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 AGTRAPQ6RW13 159 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 CASP12Q6UXS9 341 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF852Q6ZMS4 543 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 PHC2Q8IXK0 858 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 OR56A3Q8NH54 315 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 VANGL1Q8TAA9 524 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 DHRS1Q96LJ7 313 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 TEFMQ96QE5 360 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms