RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ISL1P61371 349 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CTBSQ01459 385 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SLC14A2Q15849 920 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 FAM214AQ32MH5 1076 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 LEXMQ3ZCV2 418 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF551Q7Z340 670 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 PAPD5Q8NDF8 572 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CHPT1Q8WUD6 406 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 DNASE1L2Q92874 299 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 FCRL4Q96PJ5 515 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 TPSD1Q9BZJ3 242 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CLCA3PQ9Y6N3 262 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 FAM155AB1AL88 458 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CPNE3O75131 537 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 LEFTY1O75610 366 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CTSAP10619 480 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SOX3P41225 446 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 AVPR1BP47901 424 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GABARAPL2P60520 117 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 NKX3-2P78367 333 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SHHQ15465 462 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 KCNJ8Q15842 424 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF542PQ5EBM4 170 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ENPP7Q6UWV6 458 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF517Q6ZMY9 492 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZSWIM9Q86XI8 627 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CADM3Q8N126 398 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SLC39A11Q8N1S5 342 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 DNAJB8Q8NHS0 232 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 BTN2A2Q8WVV5 523 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 MUL1Q969V5 352 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CASD1Q96PB1 797 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CLSTN3Q9BQT9 956 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GPN2Q9H9Y4 310 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 NECTIN3Q9NQS3 549 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GMEB2Q9UKD1 530 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 HCN4Q9Y3Q4 1203 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 LRRC37AA6NMS7 1700 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 OR6C70A6NIJ9 312 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CCRL2O00421 344 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 RPN2P04844 631 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 IFNA16P05015 189 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 IL3P08700 152 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CCNYL3P0C7X3 344 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 RCVRNP35243 200 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CENPAP49450 140 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 TMEM115Q12893 351 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 NFE2L1Q14494 772 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 TEFMQ96QE5 360 aaKnown RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 MBOAT4Q96T53 435 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 STMN3Q9NZ72 180 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 TMED5Q9Y3A6 229 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 GABRR3A8MPY1 467 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 JUPP14923 745 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 IRS1P35568 1242 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CLK3P49761 638 aaKnown RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 BLVRAP53004 296 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 ADNP2Q6IQ32 1131 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 SYCE2Q6PIF2 218 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 PLEKHM3Q6ZWE6 761 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 PRSS48Q7RTY5 328 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 GALNT13Q8IUC8 556 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 GEMIN6Q8WXD5 167 aaKnown RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 UBE2E3Q969T4 207 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 RAD51AP1Q96B01 352 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 SLC38A2Q96QD8 506 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CPPED1Q9BRF8 314 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 TTTY10Q9BZA0 68 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 KCNK12Q9HB15 430 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 VNN3Q9NY84 501 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 WASH3PC4AMC7 463 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 POP7O75817 140 aaKnown RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 CAPNS1P04632 268 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 HOXD8P13378 290 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 ALAS2P22557 587 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 RORCP51449 518 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 ILF3Q12906 894 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 HNRNPA0Q13151 305 aaKnown RBP9.94□□□□□ -0.82
CTCFL-216ENST00000608263 LUZP2Q86TE4 346 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 C17orf50Q8WW18 174 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 PHOX2BQ99453 314 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 SPHK2Q9NRA0 654 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 WBP1LQ9NX94 342 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 LHX3Q9UBR4 397 aa9.94□□□□□ -0.82
CTCFL-216ENST00000608263 NBASA2RRP1 2371 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 IGLV3-10A0A075B6K4 115 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 PCDH17O14917 1159 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 TSPAN12O95859 305 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 LIPAP38571 399 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 RPL3P39023 403 aaKnown RBP9.93□□□□□ -0.82
CTCFL-216ENST00000608263 CCR4P51679 360 aa9.93□□□□□ -0.82
CTCFL-216ENST00000608263 TBRG1Q3YBR2 411 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms