RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 HSD17B3P37058 310 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 NEK2P51955 445 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 HSD17B7P56937 341 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 RPS13P62277 151 aaKnown RBP11.65□□□□□ -0.54
C19orf54-208ENST00000598352 AP2B1P63010 937 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 TGM3Q08188 693 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 UNC50Q53HI1 259 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 OR4C11Q6IEV9 310 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 CHSY3Q70JA7 882 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 CNPY4Q8N129 248 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 FAM47BQ8NA70 645 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 DNAJB14Q8TBM8 379 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 ELP5Q8TE02 316 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 UBLCP1Q8WVY7 318 aaPredicted RBP11.65□□□□□ -0.54
C19orf54-208ENST00000598352 SNRNP40Q96DI7 357 aaKnown RBP11.65□□□□□ -0.54
C19orf54-208ENST00000598352 LPAR4Q99677 370 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 MAPKAP1Q9BPZ7 522 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 ROGDIQ9GZN7 287 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 RNF32Q9H0A6 362 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 CLMPQ9H6B4 373 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 EPS8L2Q9H6S3 715 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 SLAMF7Q9NQ25 335 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
C19orf54-208ENST00000598352 NTNG1Q9Y2I2 539 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
C19orf54-208ENST00000598352 CLEC18AA5D8T8 446 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 SAGE2PA6NJ88 616 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ESPNB1AK53 854 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 MAN1A2O60476 641 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 EEDO75530 441 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 WDPCPO95876 746 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ATP5F1P24539 256 aaPredicted RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 PTX3P26022 381 aaPredicted RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 BSGP35613 385 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 GPR143P51810 404 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 CCNG1P51959 295 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ARFIP1P53367 373 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 PRKAA2P54646 552 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 CDH13P55290 713 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 HERVK_113P63132 956 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 DDX39BQ13838 428 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ESPL1Q14674 2120 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 GGTA1PQ4G0N0 100 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 FCRLBQ6BAA4 426 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 MRM1Q6IN84 353 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 LETMD1Q6P1Q0 360 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 CLEC18BQ6UXF7 455 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 MYLK4Q86YV6 388 aaPredicted RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 CISD2Q8N5K1 135 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 CLEC18CQ8NCF0 446 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 GALNT11Q8NCW6 608 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 EPS8L3Q8TE67 593 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 RGMAQ96B86 450 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ANKRD9Q96BM1 317 aaPredicted RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ERVK-6Q9BXR3 956 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 DDX31Q9H8H2 851 aaKnown RBP11.64□□□□□ -0.55
C19orf54-208ENST00000598352 PPCSQ9HAB8 311 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 PRTFDC1Q9NRG1 225 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 STMN3Q9NZ72 180 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 HIVEP3Q5T1R4 2406 aa11.64□□□□□ -0.55
C19orf54-208ENST00000598352 A0A0A6YYD5 115 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 A8MUA0 341 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 CLDN4O14493 209 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 TMPRSS11DO60235 418 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 CTNSO60931 367 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
C19orf54-208ENST00000598352 TSPAN8P19075 237 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 SSR2P43308 183 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 TNFSF10P50591 281 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
C19orf54-208ENST00000598352 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
C19orf54-208ENST00000598352 SLAMF1Q13291 335 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 CUL3Q13618 768 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ZNF169Q14929 603 aaPredicted RBP11.63□□□□□ -0.55
C19orf54-208ENST00000598352 TLR1Q15399 786 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 AP5B1Q2VPB7 878 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ACER2Q5QJU3 275 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ZNF678Q5SXM1 525 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 FRG2Q64ET8 278 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 WDR93Q6P2C0 686 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 MILR1Q7Z6M3 343 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 CLNKQ7Z7G1 428 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 CRLF3Q8IUI8 442 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ARMC10Q8N2F6 343 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
C19orf54-208ENST00000598352 APCDD1LQ8NCL9 501 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 OR4F6Q8NGB9 312 aa11.63□□□□□ -0.55
C19orf54-208ENST00000598352 REPS1Q96D71 796 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms