RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GPR143P51810 404 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 HNRNPFP52597 415 aaKnown RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 RCN2Q14257 317 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 SLC29A2Q14542 456 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 MEP1AQ16819 746 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 KHDRBS2Q5VWX1 349 aaKnown RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 ZNF324BQ6AW86 544 aaPredicted RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 GOLGA7Q7Z5G4 137 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 PTGR2Q8N8N7 351 aaPredicted RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 ACOT4Q8N9L9 421 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 HUS1BQ8NHY5 278 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 WDR20Q8TBZ3 569 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 FAR1Q8WVX9 515 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 CNDP1Q96KN2 507 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 NTMT1Q9BV86 223 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 C1QTNF3Q9BXJ4 246 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 MRPL46Q9H2W6 279 aaKnown RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 ACTR8Q9H981 624 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 DMRT3Q9NQL9 472 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 PRTFDC1Q9NRG1 225 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 AGPAT4Q9NRZ5 378 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 MRPS33Q9Y291 106 aaKnown RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 ANGPTL3Q9Y5C1 460 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 SPTBN1Q01082 2364 aaKnown RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 BLACEA4D250 179 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 FOXE1O00358 373 aaPredicted RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 OR7A17O14581 309 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 TGFB1P01137 390 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 MYBL2P10244 700 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 PCNAP12004 261 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 PTX3P26022 381 aaPredicted RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 MRPL49Q13405 166 aaKnown RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 NR6A1Q15406 480 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 OR4C11Q6IEV9 310 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 BEST3Q8N1M1 668 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 APCDD1LQ8NCL9 501 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 ST6GALNAC3Q8NDV1 305 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 GRHL3Q8TE85 626 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 RGMAQ96B86 450 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 REPS1Q96D71 796 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 PHF21BQ96EK2 531 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 CSF3RQ99062 836 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 ZNF717Q9BY31 904 aaPredicted RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 OR51B5Q9H339 312 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 COPS7BQ9H9Q2 264 aaPredicted RBP12.21□□□□□ -0.45
USE1-207ENST00000596136 ZBTB26Q9HCK0 441 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 PCTPQ9UKL6 214 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
USE1-207ENST00000596136 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 PLPP1O14494 284 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 MAN1A2O60476 641 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 PRAMEF2O60811 474 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 SMIM24O75264 130 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 CLDN9O95484 217 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 RPS17P08708 135 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 CD96P40200 585 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 TAS2R50P59544 299 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 CUL3Q13618 768 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 AP5B1Q2VPB7 878 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 GGTA1PQ4G0N0 100 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 C10orf62Q5T681 223 aaPredicted RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 FCRLBQ6BAA4 426 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 RPS19BP1Q86WX3 136 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 CYP4X1Q8N118 509 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 ZCCHC7Q8N3Z6 543 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 FAM47BQ8NA70 645 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 MDS2Q8NDY4 140 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 C7orf57Q8NEG2 295 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 B3GNT7Q8NFL0 401 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 ACMSDQ8TDX5 336 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 MZB1Q8WU39 189 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.2□□□□□ -0.46
USE1-207ENST00000596136 SCYL1Q96KG9 808 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 TAAR6Q96RI8 345 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 MAPKAP1Q9BPZ7 522 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 SLX1AQ9BQ83 275 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.2□□□□□ -0.46
USE1-207ENST00000596136 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 TRIM45Q9H8W5 580 aaPredicted RBP12.2□□□□□ -0.46
USE1-207ENST00000596136 MAP10Q9P2G4 905 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 VTI1BQ9UEU0 232 aa12.2□□□□□ -0.46
USE1-207ENST00000596136 IQANK1A0A1B0GTG1 560 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 ANKUB1A6NFN9 424 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 A8MT66 165 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 F10P00742 488 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 UQCRHP07919 91 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 EDN3P14138 238 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms