RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 IRF9Q00978 393 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 ALDH6A1Q02252 535 aaKnown RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 WHAMMP3Q1A5X7 153 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 CLNKQ7Z7G1 428 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 LAS2Q8IYD9 372 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 CENPLQ8N0S6 344 aaPredicted RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 ARMC10Q8N2F6 343 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 RHEBL1Q8TAI7 183 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 ZNF473Q8WTR7 871 aaKnown RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 THAP3Q8WTV1 239 aaPredicted RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 CSF3RQ99062 836 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 TBCDQ9BTW9 1192 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 MS4A8Q9BY19 250 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 TRIM45Q9H8W5 580 aaPredicted RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 SNX15Q9NRS6 342 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 FBXW2Q9UKT8 454 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 PPIEQ9UNP9 301 aaKnown RBP21.92■■□□□ 1.1
LSM4-204ENST00000594828 NBPF19A0A087WUL8 3843 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 HMX2A2RU54 273 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 CTNSO60931 367 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 PPP2R1BP30154 601 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 TRHRP34981 398 aaPredicted RBP21.91■■□□□ 1.1
LSM4-204ENST00000594828 DCTP40126 519 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 HLCSP50747 726 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 PCDH1Q08174 1060 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 TMEM35AQ53FP2 167 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 KRTCAP3Q53RY4 240 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 ZNF787Q6DD87 383 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 CEP128Q6ZU80 1094 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 CHSY3Q70JA7 882 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 UBE3DQ7Z6J8 389 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 TMEM125Q96AQ2 219 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 VMP1Q96GC9 406 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 FRMD6Q96NE9 622 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 LYRM4Q9HD34 91 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 ADAP2Q9NPF8 381 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 KCMF1Q9P0J7 381 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 MTRF1LQ9UGC7 380 aaKnown RBP21.91■■□□□ 1.1
LSM4-204ENST00000594828 ANGPTL3Q9Y5C1 460 aa21.91■■□□□ 1.1
LSM4-204ENST00000594828 DOPEY1Q5JWR5 2465 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 A0A096LPK6 155 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 CCDC189A1A4V9 331 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 SYNDIG1LA6NDD5 238 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 SH3BGRLO75368 114 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 TGFB1P01137 390 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 IFNA16P05015 189 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 TYK2P29597 1187 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 SERPINB1P30740 379 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 ACAP2Q15057 778 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 ZNF227Q86WZ6 799 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 TMEM132CQ8N3T6 1108 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 TEX9Q8N6V9 391 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 ACOT4Q8N9L9 421 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 OR7G3Q8NG95 312 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 NCLNQ969V3 563 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 GPR137Q96N19 417 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 CCDC77Q9BR77 488 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 NINJ2Q9NZG7 142 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 CROCCQ5TZA2 2017 aa21.9■■□□□ 1.1
LSM4-204ENST00000594828 NPIPA5E9PKD4 350 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 RTCAO00442 366 aaKnown RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 CCL21O00585 134 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 NME2P1O60361 137 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 KLHL2O95198 593 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 GFAPP14136 432 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 NME2P22392 152 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ATP5A1P25705 553 aaKnown RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 CA7P43166 264 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 GPR143P51810 404 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 STX4Q12846 297 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ELAVL1Q15717 326 aaKnown RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 PFKFB4Q16877 469 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 AP5B1Q2VPB7 878 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 GRHL2Q6ISB3 625 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 KLC3Q6P597 504 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ZNF793Q6ZN11 406 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 RELL1Q8IUW5 271 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 MMGT1Q8N4V1 131 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ZNF592Q92610 1267 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 CMTM7Q96FZ5 175 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 MAPKAP1Q9BPZ7 522 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ALOXE3Q9BYJ1 711 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 TSPYL1Q9H0U9 437 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 TSPAN10Q9H1Z9 355 aaPredicted RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 ACSS3Q9H6R3 686 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 SUCOQ9UBS9 1254 aaKnown RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 ADGRE2Q9UHX3 823 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 ZNF223Q9UK11 482 aaPredicted RBP21.89■■□□□ 1.09
LSM4-204ENST00000594828 NPIPA1Q9UND3 350 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 CLCA3PQ9Y6N3 262 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 SPACA6W5XKT8 324 aa21.89■■□□□ 1.09
LSM4-204ENST00000594828 SLC19A2O60779 497 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 ITGA10O75578 1167 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 ZFAND5O76080 213 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 HIST1H1TP22492 207 aaPredicted RBP21.88■■□□□ 1.09
LSM4-204ENST00000594828 SERPINB8P50452 374 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 ALDH18A1P54886 795 aaKnown RBP21.88■■□□□ 1.09
LSM4-204ENST00000594828 CASP6P55212 293 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 NAA30Q147X3 362 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms