RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CBX6O95503 412 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 HIST1H1TP22492 207 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 PIK3CGP48736 1102 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 HSD17B7P56937 341 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MRPL49Q13405 166 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 CPSF6Q16630 551 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 TEX35Q5T0J7 233 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 RPUSD3Q6P087 351 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MYLK4Q86YV6 388 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 CRLF3Q8IUI8 442 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF595Q8IYB9 648 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 KIF2BQ8N4N8 673 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 OR52B6Q8NGF0 335 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 WDR20Q8TBZ3 569 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 ADAMTS18Q8TE60 1221 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF354BQ96LW1 612 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MAGEB10Q96LZ2 347 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MTERF1Q99551 399 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 MAPKAP1Q9BPZ7 522 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 ROGDIQ9GZN7 287 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 NOL11Q9H8H0 719 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 COPS7BQ9H9Q2 264 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 LYRM4Q9HD34 91 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 PRTFDC1Q9NRG1 225 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 TEKT2Q9UIF3 430 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 POLEQ07864 2286 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 TRAV17A0A0B4J275 112 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 A8MUA0 341 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 CLDN4O14493 209 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 SMIM24O75264 130 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 UQCRHP07919 91 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 DDX39BQ13838 428 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 UBAP2LQ14157 1087 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 OR4C11Q6IEV9 310 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 RPS27LQ71UM5 84 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 BEST3Q8N1M1 668 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 ARMC2Q8NEN0 867 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 GRHL3Q8TE85 626 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 CDK15Q96Q40 435 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 NTMT1Q9BV86 223 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 SORBS1Q9BX66 1292 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 TMEM216Q9P0N5 145 aa17.3■□□□□ 0.36
SHKBP1-202ENST00000593764 SVILO95425 2214 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PTPN13Q12923 2485 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 HIVEP3Q5T1R4 2406 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 HECTD1Q9ULT8 2610 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 OR5H15A6NDH6 313 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 A8MT66 165 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PLPP1O14494 284 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 CTNSO60931 367 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 CLDN9O95484 217 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 TNFRSF8P28908 595 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PPP2R1BP30154 601 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 ST13P50502 369 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 NEK2P51955 445 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 RPS13P62277 151 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 TRAF3Q13114 568 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 SLC13A2Q13183 592 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 NR6A1Q15406 480 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 ZRSR2Q15696 482 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 MEP1AQ16819 746 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 AP5B1Q2VPB7 878 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 APCDD1LQ8NCL9 501 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 RGMAQ96B86 450 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF717Q9BY31 904 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 SLC29A3Q9BZD2 475 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PSD3Q9NYI0 1048 aa17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PSMC3IPQ9P2W1 217 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 PPIEQ9UNP9 301 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 MRPS33Q9Y291 106 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-202ENST00000593764 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 A0A1B0GTL3 188 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 FOXE1O00358 373 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 PPP6CO00743 305 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 MYO1DO94832 1006 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 ETHE1O95571 254 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 SHBGP04278 402 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 RPS17P08708 135 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 PTX3P26022 381 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 SSR2P43308 183 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 GPR143P51810 404 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 CCNG1P51959 295 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 RCN2Q14257 317 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 TERF2Q15554 542 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 EIF2S3LQ2VIR3 472 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 CLNKQ7Z7G1 428 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 SLC5A8Q8N695 610 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 FAR1Q8WVX9 515 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 ATP6V1E2Q96A05 226 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 REPS1Q96D71 796 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 TAAR6Q96RI8 345 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 C1QTNF3Q9BXJ4 246 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 CDCP1Q9H5V8 836 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 PNO1Q9NRX1 252 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 TBK1Q9UHD2 729 aa17.28■□□□□ 0.36
SHKBP1-202ENST00000593764 MYOCOSA0A1B0GUC4 107 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 GOLGA8RI6L899 631 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms