RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 KCNC1P48547 511 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 MEOX1P50221 254 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 LIM2P55344 173 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 BIKQ13323 160 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 SERTAD2Q14140 314 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 ZKSCAN8Q15776 578 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 PDK4Q16654 411 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 PAOXQ6QHF9 649 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 FAM57AQ8TBR7 257 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CCT6BQ92526 530 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 UBE2E3Q969T4 207 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 NCLNQ969V3 563 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 KCNC2Q96PR1 638 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 RBBP8Q99708 897 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 ERP44Q9BS26 406 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 TMEM79Q9BSE2 394 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 COPS7BQ9H9Q2 264 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 PNO1Q9NRX1 252 aaKnown RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 COQ3Q9NZJ6 369 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 ZNF223Q9UK11 482 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 PTBP2Q9UKA9 531 aaKnown RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 ZNF490Q9ULM2 529 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 MTO1Q9Y2Z2 717 aaKnown RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 SNX24Q9Y343 169 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CLCA3PQ9Y6N3 262 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 GTF3C1Q12789 2109 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 OTOGQ6ZRI0 2925 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CCDC189A1A4V9 331 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 NCF1BA6NI72 391 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-205ENST00000592333 NCF1CA8MVU1 366 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-205ENST00000592333 HAX1O00165 279 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 NCF1P14598 390 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-205ENST00000592333 PTGS2P35354 604 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 PLA2G16P53816 162 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 TMEM35AQ53FP2 167 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 XKR6Q5GH73 641 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 TMEM211Q6ICI0 200 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 ARHGAP11AQ6P4F7 1023 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 ACBD4Q8NC06 268 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 OR14A16Q8NHC5 309 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 C14orf79Q96F83 325 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 KRT12Q99456 494 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 TBCDQ9BTW9 1192 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 TRIM8Q9BZR9 551 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 PRDM7Q9NQW5 492 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 SMYD2Q9NRG4 433 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 MYOTQ9UBF9 498 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 ADGRE2Q9UHX3 823 aa17.56■□□□□ 0.4
CCDC43-205ENST00000592333 TCRBV9S1A1TA0A576 114 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 FAM159BA6NKW6 160 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 USP27XA6NNY8 438 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 ADAM10O14672 748 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 SCELO95171 688 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 S100BP04271 92 aaPredicted RBP17.55■□□□□ 0.4
CCDC43-205ENST00000592333 CAPN3P20807 821 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 SPRP35270 261 aaPredicted RBP17.55■□□□□ 0.4
CCDC43-205ENST00000592333 ST13P50502 369 aaKnown RBP17.55■□□□□ 0.4
CCDC43-205ENST00000592333 ARFIP1P53367 373 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 RAB10P61026 200 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 DOC2AQ14183 400 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 C18orf21Q32NC0 220 aaPredicted RBP17.55■□□□□ 0.4
CCDC43-205ENST00000592333 HSDL2Q6YN16 418 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 C3orf62Q6ZUJ4 267 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 LRRC70Q7Z2Q7 622 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 VN1R5Q7Z5H4 357 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 STAG3L4Q8TBR4 150 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 LURAP1Q96LR2 239 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 ENKD1Q9H0I2 346 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 CD274Q9NZQ7 290 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 KCMF1Q9P0J7 381 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 SPACA6W5XKT8 324 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 FBN2P35556 2912 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 PDZD2O15018 2839 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 PKDREJQ9NTG1 2253 aa17.55■□□□□ 0.4
CCDC43-205ENST00000592333 A8MVJ9 347 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 TGFBR3LH3BV60 316 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 SSTR1P30872 391 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 PTGER1P34995 402 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 HSPA7P48741 367 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 IRF8Q02556 426 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 CAV1Q03135 178 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 STX4Q12846 297 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 BMPR2Q13873 1038 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 CMPK2Q5EBM0 449 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 GRTP1Q5TC63 336 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 CHSY3Q70JA7 882 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 MDGA2Q7Z553 956 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 FGD2Q7Z6J4 655 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 GOLM1Q8NBJ4 401 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 PSD4Q8NDX1 1056 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 TMEM52Q8NDY8 209 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 OR5L2Q8NGL0 311 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 CA5BP1Q8WTZ4 195 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 ASB5Q8WWX0 329 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 ASB15Q8WXK1 588 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 SGCZQ96LD1 299 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 TREX2Q9BQ50 279 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-205ENST00000592333 ALOXE3Q9BYJ1 711 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 CD244Q9BZW8 370 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms