RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ERVK-10P10266 1014 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ATP5DP30049 168 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 MC4RP32245 332 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 THBS2P35442 1172 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 SOX18P35713 384 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 GRIA1P42261 906 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 MAGEA3P43357 314 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 AGTR2P50052 363 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZNF140P52738 457 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 SLC12A2P55011 1212 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 EIF3BP55884 814 aaKnown RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 TAS2R50P59544 299 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CRADDP78560 199 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 RHAGQ02094 409 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 MGAT5Q09328 741 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ABRAXAS2Q15018 415 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 UAP1Q16222 522 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 TYSND1Q2T9J0 566 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 HP1BP3Q5SSJ5 553 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 UBAP2Q5T6F2 1119 aaKnown RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 MFSD4BQ5TF39 518 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 DENND5AQ6IQ26 1287 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZDHHC24Q6UX98 284 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 KIAA0408Q6ZU52 694 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZNF534Q76KX8 674 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 SNX20Q7Z614 316 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 RELL1Q8IUW5 271 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 VRK3Q8IV63 474 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CYP4Z2PQ8N1L4 340 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 MEIOBQ8N635 442 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TMEM251Q8N6I4 163 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CSNK1A1LQ8N752 337 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 PSD4Q8NDX1 1056 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 OR2A1Q8NGT9 310 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 OR9A4Q8NGU2 314 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 OR4L1Q8NH43 312 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TSLPQ969D9 159 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CAVIN3Q969G5 261 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 LRRC46Q96FV0 321 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CERS2Q96G23 380 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 VPS39Q96JC1 886 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 SIGLEC10Q96LC7 697 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TSNARE1Q96NA8 513 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 HS3ST6Q96QI5 342 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TCF12Q99081 682 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 LPAR4Q99677 370 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 GORASP1Q9BQQ3 440 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 WDR83Q9BRX9 315 aaKnown RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 REG4Q9BYZ8 158 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 STMN4Q9H169 189 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 CDC42EP4Q9H3Q1 356 aaKnown RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 LRTM1Q9HBL6 345 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 CHRAC1Q9NRG0 131 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZNF701Q9NV72 531 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZDHHC3Q9NYG2 299 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 C6orf203Q9P0P8 240 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZNF629Q9UEG4 869 aaPredicted RBP5.64□□□□□ -1.51
VPS25-204ENST00000589577 CDC42EP3Q9UKI2 254 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ACAD8Q9UKU7 415 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 RAB21Q9UL25 225 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 ZNF281Q9Y2X9 895 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TESMINQ9Y4I5 508 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 TEX264Q9Y6I9 313 aa5.64□□□□□ -1.51
VPS25-204ENST00000589577 MED12LQ86YW9 2145 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 PABPN1LA6NDY0 278 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 MROH6A6NGR9 719 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 E5RI56 91 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 G3V3Y1 287 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 H3BMM5 538 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 H7C0S8 307 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 SUSD5O60279 629 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 FKBP9O95302 570 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 GOT2P00505 430 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 TP53P04637 393 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 GSTM1P09488 218 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 GABRA1P14867 456 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 OGNP20774 298 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 FPR1P21462 350 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 ACRV1P26436 265 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 LOXP28300 417 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 NMBRP28336 390 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 SPRP35270 261 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 MSH2P43246 934 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 XCR1P46094 333 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 SERPINB9P50453 376 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 AGFG1P52594 562 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 GSTM4Q03013 218 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 FOXO1Q12778 655 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 MSLNQ13421 630 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 FRG1Q14331 258 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 ITIH4Q14624 930 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 TMED2Q15363 201 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 HYAL4Q2M3T9 481 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 CCSMST1Q4G0I0 132 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 ACSF3Q4G176 576 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 C6orf52Q5T4I8 152 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 WLSQ5T9L3 541 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 GARNL3Q5VVW2 1013 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 STEAP4Q687X5 459 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 ZNF470Q6ECI4 717 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms