RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ZNF169Q14929 603 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-209ENST00000586555 CPSF6Q16630 551 aaKnown RBP eCLIP19.35■□□□□ 0.69
CIRBP-209ENST00000586555 DEPDC1Q5TB30 811 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 B3GNTL1Q67FW5 361 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-209ENST00000586555 L3MBTL4Q8NA19 623 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 HUS1BQ8NHY5 278 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 SSC4DQ8WTU2 575 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 HAS2Q92819 552 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 RGMAQ96B86 450 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 NOL11Q9H8H0 719 aaKnown RBP19.35■□□□□ 0.69
CIRBP-209ENST00000586555 LYRM4Q9HD34 91 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 MMP25Q9NPA2 562 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 PRTFDC1Q9NRG1 225 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 STMN3Q9NZ72 180 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 TBK1Q9UHD2 729 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 DAPP1Q9UN19 280 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 SVILO95425 2214 aa19.35■□□□□ 0.69
CIRBP-209ENST00000586555 TCRBV16S1A1N1A0A5B0 115 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 CELA2AP08217 269 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 GSTA1P08263 222 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 RNF224P0DH78 156 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 MAOAP21397 527 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 CERS1P27544 350 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 SSR2P43308 183 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 LIM2P55344 173 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 ZNF33BQ06732 778 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 EIF2S3LQ2VIR3 472 aaKnown RBP19.34■□□□□ 0.69
CIRBP-209ENST00000586555 C10orf62Q5T681 223 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-209ENST00000586555 ACOT4Q8N9L9 421 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 SUN3Q8TAQ9 357 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 MTERF1Q99551 399 aaKnown RBP19.34■□□□□ 0.69
CIRBP-209ENST00000586555 BARD1Q99728 777 aaKnown RBP19.34■□□□□ 0.69
CIRBP-209ENST00000586555 NTMT1Q9BV86 223 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 RNF32Q9H0A6 362 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 PSD3Q9NYI0 1048 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 DCDC2Q9UHG0 476 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 COPG1Q9Y678 874 aaKnown RBP19.34■□□□□ 0.69
CIRBP-209ENST00000586555 CACNA1DQ01668 2161 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 TEX15Q9BXT5 2789 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 ZGRF1Q86YA3 2104 aa19.34■□□□□ 0.69
CIRBP-209ENST00000586555 IGKV3D-11A0A0A0MRZ8 115 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 ZNF500O60304 480 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 CBX6O95503 412 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 ATP5A1P25705 553 aaKnown RBP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 SLC26A5P58743 744 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 MEP1AQ16819 746 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 TTC19Q6DKK2 380 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 OR4C11Q6IEV9 310 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 H3F3CQ6NXT2 135 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 CUZD1Q86UP6 607 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 CISD2Q8N5K1 135 aaKnown RBP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 SLC5A8Q8N695 610 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 FAM47BQ8NA70 645 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 EPB41L4BQ9H329 900 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 OR51B5Q9H339 312 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 DMRT3Q9NQL9 472 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 NECTIN3Q9NQS3 549 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 AGPAT4Q9NRZ5 378 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 ASF1BQ9NVP2 202 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 MS4A12Q9NXJ0 267 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 PLEKHB1Q9UF11 243 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-209ENST00000586555 PCTPQ9UKL6 214 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 RNF11Q9Y3C5 154 aa19.33■□□□□ 0.68
CIRBP-209ENST00000586555 DIDO1Q9BTC0 2240 aaKnown RBP19.32■□□□□ 0.68
CIRBP-209ENST00000586555 TRAV17A0A0B4J275 112 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 FOXE1O00358 373 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-209ENST00000586555 SH3BGRLO75368 114 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 OTCP00480 354 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 HIST1H1TP22492 207 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-209ENST00000586555 ZRSR2Q15696 482 aaKnown RBP19.32■□□□□ 0.68
CIRBP-209ENST00000586555 UBE3DQ7Z6J8 389 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 MILR1Q7Z6M3 343 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 OR1N1Q8NGS0 311 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 TMEM216Q9P0N5 145 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 PCDHGA10Q9Y5H3 936 aa19.32■□□□□ 0.68
CIRBP-209ENST00000586555 WIPF3A6NGB9 483 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SAGE2PA6NJ88 616 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 A8MT66 165 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SAP18O00422 153 aaKnown RBP19.31■□□□□ 0.68
CIRBP-209ENST00000586555 OR7A17O14581 309 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 CTNSO60931 367 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SCELO95171 688 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 PYGBP11216 843 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 KRT15P19012 456 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 RPS13P62277 151 aaKnown RBP19.31■□□□□ 0.68
CIRBP-209ENST00000586555 STX4Q12846 297 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 IFT88Q13099 833 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 CUL3Q13618 768 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 TERF2Q15554 542 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 C4orf17Q53FE4 359 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 ACER2Q5QJU3 275 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 RPUSD3Q6P087 351 aaKnown RBP19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SLC22A9Q8IVM8 553 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SCUBE1Q8IWY4 988 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 C1QTNF3Q9BXJ4 246 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 ANKZF1Q9H8Y5 726 aa19.31■□□□□ 0.68
CIRBP-209ENST00000586555 SEMA4BQ9NPR2 832 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-209ENST00000586555 PNO1Q9NRX1 252 aaKnown RBP19.31■□□□□ 0.68
CIRBP-209ENST00000586555 PLA2G3Q9NZ20 509 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms