RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RANBP6O60518 1105 aaKnown RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 DDHD2O94830 711 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 VTNP04004 478 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 H1F0P07305 194 aaKnown RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 FAM200BP0CF97 657 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 STMN1P16949 149 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TCF7P36402 384 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 HADHAP40939 763 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 EIF2DP41214 584 aaKnown RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 TDO2P48775 406 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 HAND2P61296 217 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 RPS18P62269 152 aaKnown RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 CDR2Q01850 454 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 BFSP1Q12934 665 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 DRP2Q13474 957 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 RAPSNQ13702 412 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 STXBP2Q15833 593 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 KYNUQ16719 465 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 SGSM1Q2NKQ1 1148 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TCP11X2Q5H9J9 407 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 KLC3Q6P597 504 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TMEM154Q6P9G4 183 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 C11orf88Q6PI97 169 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 GPRIN3Q6ZVF9 776 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 CCDC91Q7Z6B0 441 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 SLFN11Q7Z7L1 901 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 ECHDC2Q86YB7 292 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 HSCBQ8IWL3 235 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 HACE1Q8IYU2 909 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 ZNF444Q8N0Y2 327 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 C17orf53Q8N3J3 647 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 TMEM116Q8NCL8 245 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 OR8K5Q8NH50 307 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 OLIG1Q8TAK6 271 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 FRAT1Q92837 279 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 SMARCE1Q969G3 411 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 CCDC47Q96A33 483 aaKnown RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 ZNF558Q96NG5 402 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 KRT12Q99456 494 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 LRRC61Q9BV99 259 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TRIM6Q9C030 488 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 SMARCAD1Q9H4L7 1026 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 DENND2DQ9H6A0 471 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 VAT1LQ9HCJ6 419 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 RGS18Q9NS28 235 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 SPG21Q9NZD8 308 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 EPHA6Q9UF33 1036 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 LRWD1Q9UFC0 647 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 GMEB2Q9UKD1 530 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 GTF3C4Q9UKN8 822 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 ODF2LQ9ULJ1 636 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 GINS2Q9Y248 185 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 FAM169AQ9Y6X4 670 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 KNTC1P50748 2209 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 ZFC3H1O60293 1989 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 MTORP42345 2549 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 ADGRG4Q8IZF6 3080 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 F8P00451 2351 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 A0A1W2PPR1 153 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 LNP1A1A4G5 178 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TMEM150BA6NC51 233 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 MSGN1A6NI15 193 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 LIPT2A6NK58 231 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 KPNA7A9QM74 516 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CDX4O14627 284 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 PSMA7O14818 248 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TEX28O15482 410 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 RNF113AO15541 343 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 CYTH3O43739 400 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 NDUFS3O75489 264 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 GJB3O75712 270 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TGDSO95455 350 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CCNE2O96020 404 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 ZSCAN5DPP0CG00 497 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 STAG3L1P0CL83 205 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TOP1P11387 765 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 CDH2P19022 906 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 GCH1P30793 250 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 PPARGP37231 505 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 CCR2P41597 374 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 LMAN1P49257 510 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 PGFP49763 221 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 GPR143P51810 404 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 ZNF41P51814 821 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 LIMK1P53667 647 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 RAD23AP54725 363 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CLDN6P56747 220 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 GSCP56915 257 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 BPIFB3P59826 476 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 RBP5P82980 135 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 UBXN1Q04323 297 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 ELAVL2Q12926 359 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 PRKAA1Q13131 559 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 ITGB3BPQ13352 177 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 PEX6Q13608 980 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 NAB2Q15742 525 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 UBE2SQ16763 222 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TAF1BQ53T94 588 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 BMP2KLQ5H9B9 411 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 GARNL3Q5VVW2 1013 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms