RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DZANK1Q9NVP4 752 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 PDP2Q9P2J9 529 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CCL27Q9Y4X3 112 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ORC6Q9Y5N6 252 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ANKRD28O15084 1053 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 NPC1O15118 1278 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ZNF888P0CJ79 500 aaPredicted RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 ZFP1Q6P2D0 407 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 TMEM26Q6ZUK4 368 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ERMP1Q7Z2K6 904 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 GALNT7Q86SF2 657 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 MINDY1Q8N5J2 469 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 RCBTB1Q8NDN9 531 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 OR9A2Q8NGT5 310 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 GDF15Q99988 308 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 RSPH9Q9H1X1 276 aaPredicted RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 CLMPQ9H6B4 373 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 APOBEC3BQ9UH17 382 aaKnown RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 IGLV3-16A0A075B6K0 115 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 A6NHS1 94 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 BBIP1A8MTZ0 92 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 SUV39H1O43463 412 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 PAPLNO95428 1278 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ENO2P09104 434 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 ARL4DP49703 201 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 HTR4Q13639 388 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 EXOSC7Q15024 291 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 DUOXA1Q1HG43 343 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 CENPNQ96H22 339 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 TEFMQ96QE5 360 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 PAIP1Q9H074 479 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 CXorf36Q9H7Y0 433 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 RPS6KA3P51812 740 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 KCNAB2Q13303 367 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 PIN1Q13526 163 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 LIN52Q52LA3 116 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 OTPQ5XKR4 325 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 LRIG1Q96JA1 1093 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ART5Q96L15 291 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 DKK3Q9UBP4 350 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 SLC13A4Q9UKG4 626 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 A0A0A6YYC8 382 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 SLC35F4A4IF30 521 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 I3L1I5 382 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 ADH1BP00325 375 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 FESP07332 822 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ZNF26P17031 533 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 PSMB9P28065 219 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 MC3RP41968 323 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 RAE1P78406 368 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 SHC2P98077 582 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 MAP4K2Q12851 820 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 MERTKQ12866 999 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 EPS8Q12929 822 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 CSTF3Q12996 717 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 GAS6Q14393 721 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 RUNDC3AQ59EK9 446 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 FOXB2Q5VYV0 432 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 GALNT15Q8N3T1 639 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 SLC37A2Q8TED4 501 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 USP7Q93009 1102 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ZNF624Q9P2J8 865 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 RAB28P51157 221 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ARHGDIAP52565 204 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 FOXM1Q08050 763 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 SCARB2Q14108 478 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 DUSP7Q16829 419 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 ALG11Q2TAA5 492 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 METRNLQ641Q3 311 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 PIK3C3Q8NEB9 887 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 OR5K2Q8NHB8 316 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 WDR92Q96MX6 357 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 MAPKAP1Q9BPZ7 522 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 GTPBP2Q9BX10 602 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 KAT8Q9H7Z6 458 aaKnown RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 UBE2ZQ9H832 354 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 CCM2LQ9NUG4 571 aaPredicted RBP9.79□□□□□ -0.84
RFFL-212ENST00000584655 SELENONQ9NZV5 590 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 CDC14AQ9UNH5 594 aa9.79□□□□□ -0.84
RFFL-212ENST00000584655 C4orf51C9J302 202 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SCAMP2O15127 329 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 OR10H3O60404 316 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 AP2A2O94973 939 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 FADS2O95864 444 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 MPC1LP0DKB6 136 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 KDELR2P33947 212 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 BNIP3Q12983 259 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 FAM91A1Q658Y4 838 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 FAM111BQ6SJ93 734 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SMARCD3Q6STE5 483 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 AHSA2Q719I0 299 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 IQCF1Q8N6M8 205 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 OR9A4Q8NGU2 314 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 AHCYL2Q96HN2 611 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 WFDC6Q9BQY6 131 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 GPATCH1Q9BRR8 931 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 REEP1Q9H902 201 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms